RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ZFAND6Q6FIF0 208 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 IQCF2Q8IXL9 164 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 STOML3Q8TAV4 291 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 CMTM2Q8TAZ6 248 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 VGLL1Q99990 258 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
SQSTM1-205ENST00000464493 RBAKDNA6NC62 111 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 HBE1P02100 147 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 SLC25A5P05141 298 aaKnown RBP10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 KIR3DS1Q14943 382 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 ZFP69Q49AA0 526 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 TMEM256Q8N2U0 113 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 C11orf45Q8TAV5 145 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 LINC01587Q99440 93 aa10.46□□□□□ -0.73
SQSTM1-205ENST00000464493 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 J3KRW8 73 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 FHITP49789 147 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 FGF8P55075 233 aaPredicted RBP10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 RRN3P1Q2M238 152 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 GFI1BQ5VTD9 330 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 TMED6Q8WW62 240 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 C20orf144Q9BQM9 153 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 TMPRSS5Q9H3S3 457 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
SQSTM1-205ENST00000464493 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
SQSTM1-205ENST00000464493 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
SQSTM1-205ENST00000464493 ZNF138P52744 262 aa10.44□□□□□ -0.74
SQSTM1-205ENST00000464493 SUMO1P63165 101 aaKnown RBP10.44□□□□□ -0.74
SQSTM1-205ENST00000464493 EIF5AL1Q6IS14 154 aaKnown RBP10.44□□□□□ -0.74
SQSTM1-205ENST00000464493 DPPA3Q6W0C5 159 aa10.44□□□□□ -0.74
SQSTM1-205ENST00000464493 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
SQSTM1-205ENST00000464493 LOC102723971A0A1B0GUV8 181 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 A0A1W2PRE2 83 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 CXorf65A6NEN9 183 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 H7BYZ3 331 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 PRM2P04554 102 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 GPX1P07203 203 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 NMBP08949 121 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 CRISP2P16562 243 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 EMP1P54849 157 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 TAS2R60P59551 318 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 NANOS2P60321 138 aaKnown RBP10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 PMS2P11Q13670 270 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 SLC51BQ86UW2 128 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 C9orf62Q8N4C0 152 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 FAM213BQ8TBF2 198 aa10.43□□□□□ -0.74
SQSTM1-205ENST00000464493 TENM2Q9NT68 2774 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 TRAV12-3A0A0B4J271 114 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 TRBV7-9A0A0J9YWB2 115 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 KLLNB2CW77 178 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 HTN1P15515 57 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 GNG5P63218 68 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 GOLT1AQ6ZVE7 132 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 C5orf17Q8NAS9 161 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 Q8TAT8 98 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 SFT2D1Q8WV19 159 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 NIPSNAP3BQ9BS92 247 aa10.42□□□□□ -0.74
SQSTM1-205ENST00000464493 SERTM2A0A1B0GWG4 89 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 C7orf71A4D174 169 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 GGTLC3B5MD39 225 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 AZU1P20160 251 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 RAB5CP51148 216 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 UBE2G2P60604 165 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 ZFAND2AQ8N6M9 145 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 NKX6-2Q9C056 277 aaPredicted RBP10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 EPDR1Q9UM22 224 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 CELA1Q9UNI1 258 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 YTHDF2Q9Y5A9 579 aaKnown RBP10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 LENEPQ9Y5L5 61 aa10.41□□□□□ -0.74
SQSTM1-205ENST00000464493 STARD9Q9P2P6 4700 aa10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 FAM74A7A6NL05 159 aa10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 K7EQM0 130 aa10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 ZNF324O75467 553 aaPredicted RBP10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 TCRAP04437 139 aa10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 H2AFB1P0C5Y9 115 aa10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 BTN1A1Q13410 526 aa10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 PHLDA1Q8WV24 401 aaPredicted RBP10.4□□□□□ -0.74
SQSTM1-205ENST00000464493 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 NUPR2A6NF83 97 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 IFNA7P01567 189 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 PRR9Q5T870 116 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 FAM222AQ5U5X8 452 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 CEMP1Q6PRD7 247 aaPredicted RBP10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 ZNF493Q6ZR52 646 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 CCDC28AQ8IWP9 274 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 PYGO2Q9BRQ0 406 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 DKK2Q9UBU2 259 aa10.39□□□□□ -0.75
SQSTM1-205ENST00000464493 TEX48A0A1B0GUV7 120 aa10.38□□□□□ -0.75
SQSTM1-205ENST00000464493 A0A1B0GV50 99 aa10.38□□□□□ -0.75
SQSTM1-205ENST00000464493 SULT1A2P50226 295 aa10.38□□□□□ -0.75
SQSTM1-205ENST00000464493 NKX2-5P52952 324 aaPredicted RBP10.38□□□□□ -0.75
SQSTM1-205ENST00000464493 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
SQSTM1-205ENST00000464493 C16orf74Q96GX8 76 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms