RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 AMTNQ6UX39 209 aa12.33□□□□□ -0.44
VPS52-215ENST00000464425 OR10J6PQ8NGY7 276 aa12.33□□□□□ -0.44
VPS52-215ENST00000464425 C11orf68Q9H3H3 251 aaKnown RBP12.33□□□□□ -0.44
VPS52-215ENST00000464425 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
VPS52-215ENST00000464425 STARD9Q9P2P6 4700 aa12.32□□□□□ -0.44
VPS52-215ENST00000464425 HBE1P02100 147 aa12.32□□□□□ -0.44
VPS52-215ENST00000464425 MIFP14174 115 aa12.32□□□□□ -0.44
VPS52-215ENST00000464425 PPT1P50897 306 aa12.32□□□□□ -0.44
VPS52-215ENST00000464425 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
VPS52-215ENST00000464425 CSMD3Q7Z407 3707 aa12.32□□□□□ -0.44
VPS52-215ENST00000464425 RBAKDNA6NC62 111 aa12.31□□□□□ -0.44
VPS52-215ENST00000464425 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
VPS52-215ENST00000464425 M0R2Z0 102 aa12.31□□□□□ -0.44
VPS52-215ENST00000464425 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
VPS52-215ENST00000464425 SPINK13Q1W4C9 94 aa12.31□□□□□ -0.44
VPS52-215ENST00000464425 C11orf45Q8TAV5 145 aa12.31□□□□□ -0.44
VPS52-215ENST00000464425 CMTM2Q8TAZ6 248 aa12.31□□□□□ -0.44
VPS52-215ENST00000464425 PPP1R14DQ9NXH3 145 aa12.31□□□□□ -0.44
VPS52-215ENST00000464425 GGTLC3B5MD39 225 aa12.3□□□□□ -0.44
VPS52-215ENST00000464425 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
VPS52-215ENST00000464425 NPIPB6E9PJ23 425 aa12.3□□□□□ -0.44
VPS52-215ENST00000464425 SLC25A5P05141 298 aaKnown RBP12.3□□□□□ -0.44
VPS52-215ENST00000464425 SUMO1P63165 101 aaKnown RBP12.3□□□□□ -0.44
VPS52-215ENST00000464425 ZNF705AQ6ZN79 300 aaPredicted RBP12.3□□□□□ -0.44
VPS52-215ENST00000464425 C9orf47Q6ZRZ4 202 aa12.3□□□□□ -0.44
VPS52-215ENST00000464425 C5orf17Q8NAS9 161 aa12.3□□□□□ -0.44
VPS52-215ENST00000464425 ZNF680Q8NEM1 530 aa12.3□□□□□ -0.44
VPS52-215ENST00000464425 LINC00477Q96M19 166 aa12.3□□□□□ -0.44
VPS52-215ENST00000464425 YTHDF2Q9Y5A9 579 aaKnown RBP12.3□□□□□ -0.44
VPS52-215ENST00000464425 IFNA7P01567 189 aa12.29□□□□□ -0.44
VPS52-215ENST00000464425 UBE2G2P60604 165 aa12.29□□□□□ -0.44
VPS52-215ENST00000464425 CCL20P78556 96 aa12.29□□□□□ -0.44
VPS52-215ENST00000464425 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
VPS52-215ENST00000464425 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
VPS52-215ENST00000464425 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
VPS52-215ENST00000464425 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 A0A1B0GV50 99 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 SERTM2A0A1B0GWG4 89 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 CCDC28AQ8IWP9 274 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 IGF2BP2-AS1Q96M15 143 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 ODF3Q96PU9 254 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 TCEAL7Q9BRU2 100 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 AGPAT4-IT1Q9H0P7 198 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 MANBALQ9NQG1 85 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 EPDR1Q9UM22 224 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 TENM2Q9NT68 2774 aa12.28□□□□□ -0.44
VPS52-215ENST00000464425 DYNC2H1Q8NCM8 4307 aaKnown RBP12.28□□□□□ -0.44
VPS52-215ENST00000464425 CRXO43186 299 aaPredicted RBP12.27□□□□□ -0.45
VPS52-215ENST00000464425 PAGE4O60829 102 aa12.27□□□□□ -0.45
VPS52-215ENST00000464425 AMBPP02760 352 aa12.27□□□□□ -0.45
VPS52-215ENST00000464425 EMP1P54849 157 aa12.27□□□□□ -0.45
VPS52-215ENST00000464425 TMEM208Q9BTX3 173 aa12.27□□□□□ -0.45
VPS52-215ENST00000464425 IGKV2-40A0A087WW87 121 aaPredicted RBP12.26□□□□□ -0.45
VPS52-215ENST00000464425 IGKV2D-40P01614 121 aaPredicted RBP12.26□□□□□ -0.45
VPS52-215ENST00000464425 TCRAP04437 139 aa12.26□□□□□ -0.45
VPS52-215ENST00000464425 CT45A10P0DMU9 189 aa12.26□□□□□ -0.45
VPS52-215ENST00000464425 ERCC8Q13216 396 aa12.26□□□□□ -0.45
VPS52-215ENST00000464425 TMEM78Q5T7P6 136 aa12.26□□□□□ -0.45
VPS52-215ENST00000464425 CST9LP1Q5W188 147 aa12.26□□□□□ -0.45
VPS52-215ENST00000464425 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
VPS52-215ENST00000464425 PHLDA1Q8WV24 401 aaPredicted RBP12.26□□□□□ -0.45
VPS52-215ENST00000464425 NEU1Q99519 415 aa12.26□□□□□ -0.45
VPS52-215ENST00000464425 VGLL1Q99990 258 aa12.26□□□□□ -0.45
VPS52-215ENST00000464425 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 NUPR2A6NF83 97 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 SMIM9A6NGZ8 99 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 K7EQM0 130 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 INSP01308 110 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 PRM2P04554 102 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 TSPOP30536 169 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 GOLT1AQ6ZVE7 132 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 HIST1H2BAQ96A08 127 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 FAM19A4Q96LR4 140 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 TXNDC17Q9BRA2 123 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 ATG101Q9BSB4 218 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 ZNF492Q9P255 531 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 GNG13Q9P2W3 67 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 CELA1Q9UNI1 258 aa12.25□□□□□ -0.45
VPS52-215ENST00000464425 FBLL1A6NHQ2 334 aaKnown RBP12.24□□□□□ -0.45
VPS52-215ENST00000464425 F6UZH7 168 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 IFNA1P01562 189 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 NMBP08949 121 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 TAGLN2P37802 199 aaKnown RBP12.24□□□□□ -0.45
VPS52-215ENST00000464425 CDKN1BP46527 198 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 ZNF138P52744 262 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 GNG5P63218 68 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 CYB561D1Q8N8Q1 229 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 RPH3ALQ9UNE2 315 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 LENEPQ9Y5L5 61 aa12.24□□□□□ -0.45
VPS52-215ENST00000464425 ZNF705GA8MUZ8 300 aaPredicted RBP12.23□□□□□ -0.45
VPS52-215ENST00000464425 J3KRW8 73 aa12.23□□□□□ -0.45
VPS52-215ENST00000464425 CRISP2P16562 243 aa12.23□□□□□ -0.45
VPS52-215ENST00000464425 LEPP41159 167 aa12.23□□□□□ -0.45
VPS52-215ENST00000464425 KIR3DS1Q14943 382 aa12.23□□□□□ -0.45
VPS52-215ENST00000464425 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
VPS52-215ENST00000464425 ZNF767PQ75MW2 155 aa12.23□□□□□ -0.45
VPS52-215ENST00000464425 SACSQ9NZJ4 4579 aa12.23□□□□□ -0.45
VPS52-215ENST00000464425 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
VPS52-215ENST00000464425 C11orf94C9JXX5 98 aa12.22□□□□□ -0.45
VPS52-215ENST00000464425 PEX7O00628 323 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms