RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 GAGE12IP0CL82 117 aa13.53□□□□□ -0.24
CCHCR1-210ENST00000464012 BTN1A1Q13410 526 aa13.53□□□□□ -0.24
CCHCR1-210ENST00000464012 PAXXQ9BUH6 204 aa13.53□□□□□ -0.24
CCHCR1-210ENST00000464012 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-210ENST00000464012 AGPAT4-IT1Q9H0P7 198 aa13.53□□□□□ -0.24
CCHCR1-210ENST00000464012 FUT9Q9Y231 359 aa13.53□□□□□ -0.24
CCHCR1-210ENST00000464012 C7orf71A4D174 169 aa13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 PRSS29PA6NIE9 313 aa13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 OR7C2O60412 319 aa13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 SLC25A5P05141 298 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 NBEAP1P0C6P0 100 aa13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 PYGO2Q9BRQ0 406 aa13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 MBD2Q9UBB5 411 aa13.52□□□□□ -0.25
CCHCR1-210ENST00000464012 HECTD4Q9Y4D8 3996 aa13.51□□□□□ -0.25
CCHCR1-210ENST00000464012 CD300CQ08708 224 aa13.51□□□□□ -0.25
CCHCR1-210ENST00000464012 FFAR4Q5NUL3 377 aa13.51□□□□□ -0.25
CCHCR1-210ENST00000464012 RNF141Q8WVD5 230 aa13.51□□□□□ -0.25
CCHCR1-210ENST00000464012 LINC00477Q96M19 166 aa13.51□□□□□ -0.25
CCHCR1-210ENST00000464012 RPL12P30050 165 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-210ENST00000464012 RNASE4P34096 147 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-210ENST00000464012 OR5I1Q13606 314 aa13.5□□□□□ -0.25
CCHCR1-210ENST00000464012 TMEM78Q5T7P6 136 aa13.5□□□□□ -0.25
CCHCR1-210ENST00000464012 Q6ZR54 194 aa13.5□□□□□ -0.25
CCHCR1-210ENST00000464012 FXYD5Q96DB9 178 aa13.5□□□□□ -0.25
CCHCR1-210ENST00000464012 VGLL1Q99990 258 aa13.5□□□□□ -0.25
CCHCR1-210ENST00000464012 KLLNB2CW77 178 aa13.49□□□□□ -0.25
CCHCR1-210ENST00000464012 IFNA5P01569 189 aa13.49□□□□□ -0.25
CCHCR1-210ENST00000464012 GPX1P07203 203 aa13.49□□□□□ -0.25
CCHCR1-210ENST00000464012 C9orf47Q6ZRZ4 202 aa13.49□□□□□ -0.25
CCHCR1-210ENST00000464012 LINC00612Q8N6U2 182 aa13.49□□□□□ -0.25
CCHCR1-210ENST00000464012 SCGB1C1Q8TD33 95 aa13.49□□□□□ -0.25
CCHCR1-210ENST00000464012 FAM19A4Q96LR4 140 aa13.49□□□□□ -0.25
CCHCR1-210ENST00000464012 A0A0J9YY99 117 aa13.48□□□□□ -0.25
CCHCR1-210ENST00000464012 UBE2L3P68036 154 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-210ENST00000464012 PRR9Q5T870 116 aa13.48□□□□□ -0.25
CCHCR1-210ENST00000464012 Q6ZTI0 123 aa13.48□□□□□ -0.25
CCHCR1-210ENST00000464012 GSN-AS1Q9NRJ2 163 aa13.48□□□□□ -0.25
CCHCR1-210ENST00000464012 TRAV26-1A0A087WT03 109 aa13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 A0A1B0GVY2 172 aa13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 EIF3GO75821 320 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 FAM3BP58499 235 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 Q8TAT8 98 aa13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 ZNF503Q96F45 646 aa13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 ALG5Q9Y673 324 aa13.47□□□□□ -0.25
CCHCR1-210ENST00000464012 ZNF324O75467 553 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 CRISP2P16562 243 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 HOXA5P20719 270 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 CCL18P55774 89 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 RANP62826 216 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 EIF4E3Q8N5X7 224 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 ZFAND2AQ8N6M9 145 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 ZNF680Q8NEM1 530 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 Q9H3A6 140 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 WFDC1Q9HC57 220 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 ZNF492Q9P255 531 aa13.46□□□□□ -0.25
CCHCR1-210ENST00000464012 RGS13O14921 159 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 M6PRP20645 277 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 CSN1S1P47710 185 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 SOHLH1Q5JUK2 328 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 C1orf134Q5TEV5 83 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 Q6ZQT7 251 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 C11orf72Q8NBR9 251 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 LINC00588Q9Y4M8 146 aa13.45□□□□□ -0.26
CCHCR1-210ENST00000464012 TRGV2A0A075B6R0 118 aa13.44□□□□□ -0.26
CCHCR1-210ENST00000464012 TRGV1A0A0A0MS02 117 aa13.44□□□□□ -0.26
CCHCR1-210ENST00000464012 ZNF138P52744 262 aa13.44□□□□□ -0.26
CCHCR1-210ENST00000464012 TAS2R45P59539 299 aa13.44□□□□□ -0.26
CCHCR1-210ENST00000464012 ZNRF2Q8NHG8 242 aa13.44□□□□□ -0.26
CCHCR1-210ENST00000464012 KLF12Q9Y4X4 402 aa13.44□□□□□ -0.26
CCHCR1-210ENST00000464012 ANXA2RQ3ZCQ2 193 aa13.43□□□□□ -0.26
CCHCR1-210ENST00000464012 SSX7Q7RTT5 188 aa13.43□□□□□ -0.26
CCHCR1-210ENST00000464012 RXFP4Q8TDU9 374 aa13.43□□□□□ -0.26
CCHCR1-210ENST00000464012 HYLS1Q96M11 299 aa13.43□□□□□ -0.26
CCHCR1-210ENST00000464012 LINC00467Q9BRT7 94 aa13.43□□□□□ -0.26
CCHCR1-210ENST00000464012 TP53TG3Q9ULZ0 132 aa13.43□□□□□ -0.26
CCHCR1-210ENST00000464012 RPH3ALQ9UNE2 315 aa13.43□□□□□ -0.26
CCHCR1-210ENST00000464012 NMBP08949 121 aa13.42□□□□□ -0.26
CCHCR1-210ENST00000464012 ACOT6Q3I5F7 207 aaPredicted RBP13.42□□□□□ -0.26
CCHCR1-210ENST00000464012 ARPC5LQ9BPX5 153 aa13.42□□□□□ -0.26
CCHCR1-210ENST00000464012 DNAH2Q9P225 4427 aa13.42□□□□□ -0.26
CCHCR1-210ENST00000464012 DNAH17Q9UFH2 4485 aa13.42□□□□□ -0.26
CCHCR1-210ENST00000464012 FAT2Q9NYQ8 4349 aa13.41□□□□□ -0.26
CCHCR1-210ENST00000464012 IGHV1OR15-1A0A075B7D0 117 aa13.41□□□□□ -0.26
CCHCR1-210ENST00000464012 NBDYA0A0U1RRE5 68 aa13.41□□□□□ -0.26
CCHCR1-210ENST00000464012 TCL1AP56279 114 aa13.41□□□□□ -0.26
CCHCR1-210ENST00000464012 RAB2AP61019 212 aa13.41□□□□□ -0.26
CCHCR1-210ENST00000464012 LYPD1Q8N2G4 141 aa13.41□□□□□ -0.26
CCHCR1-210ENST00000464012 MRPL16Q9NX20 251 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-210ENST00000464012 A0A1W2PPV4 95 aa13.4□□□□□ -0.26
CCHCR1-210ENST00000464012 RBAKDNA6NC62 111 aa13.4□□□□□ -0.26
CCHCR1-210ENST00000464012 HMGB3O15347 200 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-210ENST00000464012 MUC21Q5SSG8 566 aa13.4□□□□□ -0.26
CCHCR1-210ENST00000464012 DIRC3C9JPN6 131 aa13.39□□□□□ -0.27
CCHCR1-210ENST00000464012 SPINK4O60575 86 aa13.39□□□□□ -0.27
CCHCR1-210ENST00000464012 PTTG1O95997 202 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms