RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SHANK2-AS3Q9BTD1 123 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 SLC25A39Q9BZJ4 359 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-204ENST00000463622 TIMM9Q9Y5J7 89 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 TRAV30A0A087WSZ9 112 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 BORCS7-ASMTA0A0B4J1R7 106 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 TRAV8-2A0A0B4J237 113 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 IGHV7-4-1A0A0J9YVY3 117 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF98A6NK75 572 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 A8MWP6 167 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 CHEK1O14757 476 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 MPDU1O75352 247 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 LY6G6CO95867 125 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 OR10J4P0C629 311 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 SEC11BP0C7V7 166 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 C8orf88P0DMB2 117 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 FOLR2P14207 255 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 M6PRP20645 277 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 SULT1A2P50226 295 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 RPL24P83731 157 aaKnown RBP2.64□□□□□ -1.99
SCFD1-204ENST00000463622 TMEM41BQ5BJD5 291 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 FAM78BQ5VT40 261 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 Q6ZRG5 221 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 LINC00305Q7Z4B0 112 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 OR10G4Q8NGN3 311 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 OR10G9Q8NGN4 311 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 OR10G7Q8NGN6 311 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 OR9G4Q8NGQ1 327 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 PPP1R14BQ96C90 147 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 PHYHIPLQ96FC7 376 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 RHPN1-AS1Q9BWJ2 59 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 WFDC10AQ9H1F0 79 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF586Q9NXT0 402 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 SMPXQ9UHP9 88 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 FUT9Q9Y231 359 aa2.64□□□□□ -1.99
SCFD1-204ENST00000463622 HECTD4Q9Y4D8 3996 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 HERC1Q15751 4861 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 IGLV5-45A0A087WSX0 123 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 C9JQL5 133 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 LGALS9O00182 355 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 SOCS3O14543 225 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 OVOL1O14753 267 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 CYB5BO43169 146 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 COX7A2P2O60397 106 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 CIDEAO60543 219 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 HYPMO75409 117 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 STAG3L2P0CL84 134 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 STAG3L3P0CL85 134 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 ARL14EPLP0DKL9 152 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 IGLC2P0DOY2 106 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 CBLN1P23435 193 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 CDC34P49427 236 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-204ENST00000463622 C10orf113Q5VZT2 155 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 C16orf54Q6UWD8 224 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 TMEM61Q8N0U2 210 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 GBGT1Q8N5D6 347 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 RNF182Q8N6D2 247 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 Q8WTZ3 238 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 FXYD5Q96DB9 178 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 GNPNAT1Q96EK6 184 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-204ENST00000463622 ATP6V0BQ99437 205 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 DNAJC4Q9NNZ3 241 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 RABAC1Q9UI14 185 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 HIGD1AQ9Y241 93 aa2.63□□□□□ -1.99
SCFD1-204ENST00000463622 YTHDF2Q9Y5A9 579 aaKnown RBP2.63□□□□□ -1.99
SCFD1-204ENST00000463622 MAP1LC3B2A6NCE7 125 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF705EA8MWA4 302 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 SMIM1B2RUZ4 78 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 GGTLC3B5MD39 225 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 USP17L23D6RBM5 183 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 C17orf112F2Z3M2 114 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 M0R3E3 92 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 IGLV1-51P01701 117 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 ZP3P21754 424 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 GCHFRP30047 84 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 ATP5G3P48201 142 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 TFPI2P48307 235 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 SELENOTP62341 195 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 GNG5P63218 68 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 DEFB114Q30KQ6 69 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 ACOT6Q3I5F7 207 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 AKR1C8PQ5T2L2 129 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 TCF24Q7RTU0 167 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 EXOC3-AS1Q8N2X6 119 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 STPG4Q8N801 248 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF709Q8N972 641 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 MBD3L1Q8WWY6 194 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 SAT2Q96F10 170 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 MAP1LC3BQ9GZQ8 125 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 DAZ1Q9NQZ3 744 aaKnown RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 TECRQ9NZ01 308 aaKnown RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 CTXND1A0A1B0GTU2 59 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF705FA8MVS1 300 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-204ENST00000463622 F6UB75 175 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 K7EMT4 169 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 TSPAN4O14817 238 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 OR7C2O60412 319 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 SAP30O75446 220 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 CD7P09564 240 aa2.62□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF705DP0CH99 300 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms