RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 OR7C2O60412 319 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 MGST1P10620 155 aaKnown RBP6.03□□□□□ -1.44
USP4-207ENST00000462673 KRTAP10-3P60369 221 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 RHOGP84095 191 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 NDPQ00604 133 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 VAMP3Q15836 100 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 KIAA1644Q3SXP7 199 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 C19orf54Q5BKX5 351 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 ETFRF1Q6IPR1 90 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 MIR17HGQ75NE6 70 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 OR1N2Q8NGR9 330 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 SMIM12Q96EX1 92 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 GRAMD2BQ96HH9 432 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 TMEM191AQ9H0A3 160 aa6.03□□□□□ -1.44
USP4-207ENST00000462673 RNASE7Q9H1E1 156 aaKnown RBP6.03□□□□□ -1.44
USP4-207ENST00000462673 PEF1Q9UBV8 284 aaKnown RBP6.03□□□□□ -1.44
USP4-207ENST00000462673 TRAV3A0A0B4J244 114 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 GGTLC3B5MD39 225 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 TEX22C9J3V5 150 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 LINC01619G3V211 115 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 LGALS1P09382 135 aaKnown RBP6.02□□□□□ -1.45
USP4-207ENST00000462673 APELAP0DMC3 54 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 HIST1H1EP10412 219 aaKnown RBP6.02□□□□□ -1.45
USP4-207ENST00000462673 CRYBB3P26998 211 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 UBE2L3P68036 154 aaKnown RBP6.02□□□□□ -1.45
USP4-207ENST00000462673 MRGPRG-AS1Q2M3A8 158 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 C15orf32Q32M92 178 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 Q56UQ5 140 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 TCTEX1D4Q5JR98 221 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 OR11H1Q8NG94 326 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 MYOZ3Q8TDC0 251 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 PMCHL2Q9BQD1 86 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 TMEM70Q9BUB7 260 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 KLK15Q9H2R5 256 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 F11RQ9Y624 299 aaKnown RBP6.02□□□□□ -1.45
USP4-207ENST00000462673 COL6A5A8TX70 2615 aa6.02□□□□□ -1.45
USP4-207ENST00000462673 OR4C46A6NHA9 309 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 K7ERU9 68 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 PEX7O00628 323 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 SPINK4O60575 86 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 IGLV2-8P01709 118 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 C8orf88P0DMB2 117 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 INSL3P51460 131 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 SSBP2P81877 361 aaPredicted RBP6.01□□□□□ -1.45
USP4-207ENST00000462673 SLAQ13239 276 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 RNF151Q2KHN1 245 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 KLK9Q2XQG4 91 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 FAM106AQ4KMX7 169 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 C10orf55Q5SWW7 151 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 ASPHD1Q5U4P2 390 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 SLC25A34Q6PIV7 304 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 C10orf99Q6UWK7 81 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 C8orf86Q6ZUL3 223 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 ATOH7Q8N100 152 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 FAM19A2Q8N3H0 131 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 WFDC9Q8NEX5 89 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 OR10W1Q8NGF6 305 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 OR1L4Q8NGR5 311 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 CHCHD1Q96BP2 118 aaKnown RBP6.01□□□□□ -1.45
USP4-207ENST00000462673 VPS25Q9BRG1 176 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 SEPSECSQ9HD40 501 aaKnown RBP6.01□□□□□ -1.45
USP4-207ENST00000462673 PEMTQ9UBM1 199 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 KLK9Q9UKQ9 250 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 TNCP24821 2201 aa6.01□□□□□ -1.45
USP4-207ENST00000462673 IGLV11-55A0A075B6I3 123 aa6□□□□□ -1.45
USP4-207ENST00000462673 E7EUB6 86 aa6□□□□□ -1.45
USP4-207ENST00000462673 FRMD6-AS1P0C7T7 363 aa6□□□□□ -1.45
USP4-207ENST00000462673 IGLL1P15814 213 aa6□□□□□ -1.45
USP4-207ENST00000462673 MFAP2P55001 183 aa6□□□□□ -1.45
USP4-207ENST00000462673 MFAP4P55083 255 aa6□□□□□ -1.45
USP4-207ENST00000462673 HIST1H1AQ02539 215 aaPredicted RBP6□□□□□ -1.45
USP4-207ENST00000462673 WT1-ASQ06250 92 aa6□□□□□ -1.45
USP4-207ENST00000462673 CT83Q5H943 113 aa6□□□□□ -1.45
USP4-207ENST00000462673 MS4A6AQ9H2W1 248 aa6□□□□□ -1.45
USP4-207ENST00000462673 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.99□□□□□ -1.45
USP4-207ENST00000462673 A0A1B0GXF2 115 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 C2orf70A6NJV1 201 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 TAX1BP3O14907 124 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 COX7A2P2O60397 106 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 IGHV3-11P01762 117 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 CLEC3BP05452 202 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 OR5AL1P0C617 328 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 HBBP68871 147 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 C2orf83Q53S99 150 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 LCN12Q6JVE5 192 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 EBLN2Q6P2I7 272 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 DEFB125Q8N687 156 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 TMEM190Q8WZ59 177 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 FANCD2OSQ96PS1 177 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 CST9LQ9H4G1 147 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 C21orf62Q9NYP8 219 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 ZNF492Q9P255 531 aa5.99□□□□□ -1.45
USP4-207ENST00000462673 CGB1A6NKQ9 187 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 ADARB2-AS1A8MUL3 147 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 OVOL1O14753 267 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 CRXO43186 299 aaPredicted RBP5.98□□□□□ -1.45
USP4-207ENST00000462673 GNG7O60262 68 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 MYOD1P15172 320 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 S100A7P31151 101 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 FCGR2BP31994 310 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms