RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
CDKN1A-206ENST00000462537 RNF222A6NCQ9 220 aa13.2□□□□□ -0.3
CDKN1A-206ENST00000462537 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
CDKN1A-206ENST00000462537 LYPD1Q8N2G4 141 aa13.2□□□□□ -0.3
CDKN1A-206ENST00000462537 PSMG3Q9BT73 122 aaPredicted RBP13.2□□□□□ -0.3
CDKN1A-206ENST00000462537 LYRM9A8MSI8 78 aa13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 CDC34P49427 236 aaPredicted RBP13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 PQLC2Q6ZP29 291 aa13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 CCDC28AQ8IWP9 274 aa13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 OR2G3Q8NGZ4 309 aa13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 VGLL1Q99990 258 aa13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 SH3BGRL3Q9H299 93 aa13.19□□□□□ -0.3
CDKN1A-206ENST00000462537 SLC25A5P05141 298 aaKnown RBP13.18□□□□□ -0.3
CDKN1A-206ENST00000462537 DEFB130BP0DP73 79 aa13.18□□□□□ -0.3
CDKN1A-206ENST00000462537 DEFB130AP0DP74 79 aa13.18□□□□□ -0.3
CDKN1A-206ENST00000462537 RPL7L1Q6DKI1 246 aaKnown RBP13.18□□□□□ -0.3
CDKN1A-206ENST00000462537 TMEM263Q8WUH6 116 aaKnown RBP13.18□□□□□ -0.3
CDKN1A-206ENST00000462537 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
CDKN1A-206ENST00000462537 PLAC8L1A1L4L8 177 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 C7orf71A4D174 169 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 ARPC5O15511 151 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 MBP02144 154 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 GPX1P07203 203 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 RNASE4P34096 147 aaKnown RBP13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 SERF2P84101 59 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 ZNF493Q6ZR52 646 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
CDKN1A-206ENST00000462537 G3V3Q6 166 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 SMLR1H3BR10 107 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 ARL14EPLP0DKL9 152 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 BTN1A1Q13410 526 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 FAM74A1Q5RGS3 127 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 CMTM2Q8TAZ6 248 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 RNASE8Q8TDE3 154 aaKnown RBP13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 FAM19A4Q96LR4 140 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 TIMM8BQ9Y5J9 83 aaPredicted RBP13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 DNAH1Q9P2D7 4330 aa13.16□□□□□ -0.3
CDKN1A-206ENST00000462537 KLLNB2CW77 178 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 CRISP2P16562 243 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 ZNF138P52744 262 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 CD300CQ08708 224 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 Q8TAT8 98 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 RXFP4Q8TDU9 374 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 RAB24Q969Q5 203 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 PYGO2Q9BRQ0 406 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 NOP10Q9NPE3 64 aaKnown RBP13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 ZNF492Q9P255 531 aa13.15□□□□□ -0.3
CDKN1A-206ENST00000462537 RBAKDNA6NC62 111 aa13.14□□□□□ -0.31
CDKN1A-206ENST00000462537 PGPA6NDG6 321 aa13.14□□□□□ -0.31
CDKN1A-206ENST00000462537 SNURFLB1AK76 121 aa13.14□□□□□ -0.31
CDKN1A-206ENST00000462537 DIRC3C9JPN6 131 aa13.14□□□□□ -0.31
CDKN1A-206ENST00000462537 TAAR5O14804 337 aa13.13□□□□□ -0.31
CDKN1A-206ENST00000462537 STAG3L2P0CL84 134 aa13.13□□□□□ -0.31
CDKN1A-206ENST00000462537 STAG3L3P0CL85 134 aa13.13□□□□□ -0.31
CDKN1A-206ENST00000462537 ACTR3CQ9C0K3 210 aaPredicted RBP13.13□□□□□ -0.31
CDKN1A-206ENST00000462537 CBY3A6NI87 242 aa13.12□□□□□ -0.31
CDKN1A-206ENST00000462537 NMBP08949 121 aa13.12□□□□□ -0.31
CDKN1A-206ENST00000462537 PRR9Q5T870 116 aa13.12□□□□□ -0.31
CDKN1A-206ENST00000462537 IQCF2Q8IXL9 164 aa13.12□□□□□ -0.31
CDKN1A-206ENST00000462537 ZFAND2AQ8N6M9 145 aa13.12□□□□□ -0.31
CDKN1A-206ENST00000462537 FAM210BQ96KR6 192 aa13.12□□□□□ -0.31
CDKN1A-206ENST00000462537 HYDINQ4G0P3 5121 aa13.11□□□□□ -0.31
CDKN1A-206ENST00000462537 RGS13O14921 159 aa13.11□□□□□ -0.31
CDKN1A-206ENST00000462537 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
CDKN1A-206ENST00000462537 CXorf1O96002 111 aa13.11□□□□□ -0.31
CDKN1A-206ENST00000462537 GCHFRP30047 84 aa13.11□□□□□ -0.31
CDKN1A-206ENST00000462537 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 F5H768 121 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 ATP5G1P05496 136 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 ATP5G3P48201 142 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 AKR1C8PQ5T2L2 129 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 TMEM88Q6PEY1 159 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 GOLT1AQ6ZVE7 132 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 EIF4E3Q8N5X7 224 aaKnown RBP13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
CDKN1A-206ENST00000462537 P0DMU3 169 aa13.09□□□□□ -0.31
CDKN1A-206ENST00000462537 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
CDKN1A-206ENST00000462537 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
CDKN1A-206ENST00000462537 GNG5P63218 68 aa13.09□□□□□ -0.31
CDKN1A-206ENST00000462537 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
CDKN1A-206ENST00000462537 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
CDKN1A-206ENST00000462537 GAGE12BA1L429 117 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 GAGE7O76087 117 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 Q6ZQT7 251 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 ST6GAL2Q96JF0 529 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 ARPC5LQ9BPX5 153 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 GSN-AS1Q9NRJ2 163 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 CYTL1Q9NRR1 136 aa13.08□□□□□ -0.32
CDKN1A-206ENST00000462537 IGHV1OR15-1A0A075B7D0 117 aa13.07□□□□□ -0.32
CDKN1A-206ENST00000462537 CTXND1A0A1B0GTU2 59 aa13.07□□□□□ -0.32
CDKN1A-206ENST00000462537 ZNF345Q14585 488 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms