RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 DKK2Q9UBU2 259 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
ERCC3-206ENST00000462306 PLECQ15149 4684 aaKnown RBP11.33□□□□□ -0.6
ERCC3-206ENST00000462306 LYSTQ99698 3801 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 SACSQ9NZJ4 4579 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 H7BYZ3 331 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 J3KRW8 73 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 TAS2R60P59551 318 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 SUN5Q8TC36 379 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 ACTR3CQ9C0K3 210 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-206ENST00000462306 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
ERCC3-206ENST00000462306 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 PGPA6NDG6 321 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 KLLNB2CW77 178 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
ERCC3-206ENST00000462306 CRISP2P16562 243 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 GCHFRP30047 84 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 CSN1S1P47710 185 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 TMEM78Q5T7P6 136 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 RXFP4Q8TDU9 374 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 ARPC5LQ9BPX5 153 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 ZNF492Q9P255 531 aa11.31□□□□□ -0.6
ERCC3-206ENST00000462306 TRAV10A0A0B4J240 114 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 A0A0D9SG52 128 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 ZFAND2AQ8N6M9 145 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 HYLS1Q96M11 299 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 RYR2Q92736 4967 aa11.3□□□□□ -0.6
ERCC3-206ENST00000462306 C7orf71A4D174 169 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 CXorf1O96002 111 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 NMBP08949 121 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 HTN1P15515 57 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 ZNF138P52744 262 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 CD300CQ08708 224 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 AKR1C8PQ5T2L2 129 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 Q8TAT8 98 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 C2CD4CQ8TF44 421 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 ALMS1Q8TCU4 4167 aa11.29□□□□□ -0.6
ERCC3-206ENST00000462306 DNAH1Q9P2D7 4330 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 BCL2L11O43521 198 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-206ENST00000462306 BTN1A1Q13410 526 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 FAM74A1Q5RGS3 127 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 PRR9Q5T870 116 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 ZNF493Q6ZR52 646 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
ERCC3-206ENST00000462306 C16orf74Q96GX8 76 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 NIPSNAP3BQ9BS92 247 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 TMEM167BQ9NRX6 74 aa11.28□□□□□ -0.6
ERCC3-206ENST00000462306 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.61
ERCC3-206ENST00000462306 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
ERCC3-206ENST00000462306 GPX1P07203 203 aa11.27□□□□□ -0.61
ERCC3-206ENST00000462306 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
ERCC3-206ENST00000462306 TMEM263Q8WUH6 116 aaKnown RBP11.27□□□□□ -0.61
ERCC3-206ENST00000462306 KANTRA0A1W2PQU2 76 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 IGLL5B9A064 214 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 GNG5P63218 68 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 TMUB2Q71RG4 321 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 LINC00476Q8WZB0 136 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 PYGO2Q9BRQ0 406 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
ERCC3-206ENST00000462306 APLNQ9ULZ1 77 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 RPH3ALQ9UNE2 315 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
ERCC3-206ENST00000462306 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 SEC11BP0C7V7 166 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 TCTAP57738 103 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 DAD1P61803 113 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 Q6ZQT7 251 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 GOLT1AQ6ZVE7 132 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 C5orf17Q8NAS9 161 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
ERCC3-206ENST00000462306 FHITP49789 147 aa11.24□□□□□ -0.61
ERCC3-206ENST00000462306 FGF8P55075 233 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-206ENST00000462306 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
ERCC3-206ENST00000462306 LGALSLQ3ZCW2 172 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-206ENST00000462306 CCDC28AQ8IWP9 274 aa11.24□□□□□ -0.61
ERCC3-206ENST00000462306 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
ERCC3-206ENST00000462306 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-206ENST00000462306 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 A0A1W2PRE2 83 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 MAP1LC3B2A6NCE7 125 aa11.23□□□□□ -0.61
ERCC3-206ENST00000462306 PFDN1O60925 122 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms