RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
SSR4-206ENST00000460616 PLXNB1O43157 2135 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 CADP27708 2225 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 VSTM5A8MXK1 200 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 CNTFRP26992 372 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 CCL8P80075 99 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 BBC3Q96PG8 261 aaPredicted RBP12.15□□□□□ -0.46
SSR4-206ENST00000460616 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 IGKV1-17P01599 117 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 THBDP07204 575 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 ZC2HC1BQ5TFG8 222 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 FAM57AQ8TBR7 257 aa12.15□□□□□ -0.46
SSR4-206ENST00000460616 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 H3BRN7 92 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 FCN3O75636 299 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 KLF17Q5JT82 389 aaPredicted RBP12.14□□□□□ -0.47
SSR4-206ENST00000460616 AMTNQ6UX39 209 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 C16orf97H3BN30 126 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 I3L2K1 104 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 DPM2O94777 84 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 FOXC2Q99958 501 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
SSR4-206ENST00000460616 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 TEX22C9J3V5 150 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 PRB1P04280 392 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 TCTEX1D4Q5JR98 221 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 POLEQ07864 2286 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 LINC01546A6NGU7 62 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 CRYGBP07316 175 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 EGR2P11161 476 aaPredicted RBP12.13□□□□□ -0.47
SSR4-206ENST00000460616 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 ZNF502Q8TBZ5 544 aa12.13□□□□□ -0.47
SSR4-206ENST00000460616 INSL3P51460 131 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 MTURNQ8N3F0 131 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 TRAV26-1A0A087WT03 109 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 PLGLAQ15195 96 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 TAL2Q16559 108 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 WFDC12Q8WWY7 111 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 NXT2Q9NPJ8 142 aaKnown RBP12.12□□□□□ -0.47
SSR4-206ENST00000460616 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
SSR4-206ENST00000460616 KMT2BQ9UMN6 2715 aaPredicted RBP12.11□□□□□ -0.47
SSR4-206ENST00000460616 MRPS12O15235 138 aaKnown RBP12.11□□□□□ -0.47
SSR4-206ENST00000460616 ATP5LO75964 103 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 HLA-DRB4P13762 266 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 ZNF474Q6S9Z5 364 aaPredicted RBP12.11□□□□□ -0.47
SSR4-206ENST00000460616 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 MRAP2Q96G30 205 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 RNF185Q96GF1 192 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 HLA-DRB4X5D2U9 266 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 TRAV40A0A0B4J280 105 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 NDUFB3O43676 98 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 IL4P05112 153 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 LINC01559Q495D7 138 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 RNF125Q96EQ8 232 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 PRO0461Q9UI25 63 aa12.11□□□□□ -0.47
SSR4-206ENST00000460616 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
SSR4-206ENST00000460616 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
SSR4-206ENST00000460616 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
SSR4-206ENST00000460616 PRRG2O14669 202 aa12.1□□□□□ -0.47
SSR4-206ENST00000460616 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
SSR4-206ENST00000460616 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
SSR4-206ENST00000460616 TMEM158Q8WZ71 300 aa12.1□□□□□ -0.47
SSR4-206ENST00000460616 CRYBA4P53673 196 aa12.1□□□□□ -0.47
SSR4-206ENST00000460616 PRR25Q96S07 402 aa12.1□□□□□ -0.47
SSR4-206ENST00000460616 A0A1B0GWB2 263 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 PDE6HQ13956 83 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 RRN3P1Q2M238 152 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 C3orf36Q3SXR2 165 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 LYPD2Q6UXB3 125 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 RALYQ9UKM9 306 aaKnown RBP12.09□□□□□ -0.47
SSR4-206ENST00000460616 ABCA1O95477 2261 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 IGKV2-40A0A087WW87 121 aaPredicted RBP12.09□□□□□ -0.47
SSR4-206ENST00000460616 IGKV2D-40P01614 121 aaPredicted RBP12.09□□□□□ -0.47
SSR4-206ENST00000460616 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
SSR4-206ENST00000460616 GEMIN7Q9H840 131 aaKnown RBP12.09□□□□□ -0.47
SSR4-206ENST00000460616 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
SSR4-206ENST00000460616 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
SSR4-206ENST00000460616 MRPL35Q9NZE8 188 aaKnown RBP12.08□□□□□ -0.48
SSR4-206ENST00000460616 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
SSR4-206ENST00000460616 APOMO95445 188 aa12.08□□□□□ -0.48
SSR4-206ENST00000460616 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
SSR4-206ENST00000460616 C20orf78Q9BR46 151 aa12.08□□□□□ -0.48
SSR4-206ENST00000460616 MRPL16Q9NX20 251 aaKnown RBP12.08□□□□□ -0.48
SSR4-206ENST00000460616 K7EIM0 57 aa12.07□□□□□ -0.48
SSR4-206ENST00000460616 DLX6P56179 175 aa12.07□□□□□ -0.48
SSR4-206ENST00000460616 ZNF575Q86XF7 245 aa12.07□□□□□ -0.48
SSR4-206ENST00000460616 ORM1P02763 201 aa12.06□□□□□ -0.48
SSR4-206ENST00000460616 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms