RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CMTM2Q8TAZ6 248 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 PHYHIPLQ96FC7 376 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 AGPAT4-IT1Q9H0P7 198 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 Q9H3A6 140 aa16.56■□□□□ 0.24
CBX3-204ENST00000456948 PLECQ15149 4684 aaKnown RBP16.55■□□□□ 0.24
CBX3-204ENST00000456948 GPX1P07203 203 aa16.55■□□□□ 0.24
CBX3-204ENST00000456948 CDC34P49427 236 aaPredicted RBP16.55■□□□□ 0.24
CBX3-204ENST00000456948 ERCC8Q13216 396 aa16.55■□□□□ 0.24
CBX3-204ENST00000456948 TMEM263Q8WUH6 116 aaKnown RBP16.55■□□□□ 0.24
CBX3-204ENST00000456948 ZNF503Q96F45 646 aa16.55■□□□□ 0.24
CBX3-204ENST00000456948 FAM210BQ96KR6 192 aa16.55■□□□□ 0.24
CBX3-204ENST00000456948 PYGO2Q9BRQ0 406 aa16.55■□□□□ 0.24
CBX3-204ENST00000456948 TIMM8BQ9Y5J9 83 aaPredicted RBP16.55■□□□□ 0.24
CBX3-204ENST00000456948 DNAH1Q9P2D7 4330 aa16.54■□□□□ 0.24
CBX3-204ENST00000456948 IGHV4-4A0A075B6R2 117 aa16.54■□□□□ 0.24
CBX3-204ENST00000456948 TRAV12-3A0A0B4J271 114 aa16.54■□□□□ 0.24
CBX3-204ENST00000456948 RNF222A6NCQ9 220 aa16.54■□□□□ 0.24
CBX3-204ENST00000456948 NDUFAF3Q9BU61 184 aa16.54■□□□□ 0.24
CBX3-204ENST00000456948 OTORQ9NRC9 128 aa16.54■□□□□ 0.24
CBX3-204ENST00000456948 HYDINQ4G0P3 5121 aa16.54■□□□□ 0.24
CBX3-204ENST00000456948 C7orf71A4D174 169 aa16.53■□□□□ 0.24
CBX3-204ENST00000456948 RBAKDNA6NC62 111 aa16.53■□□□□ 0.24
CBX3-204ENST00000456948 ACTR3CQ9C0K3 210 aaPredicted RBP16.53■□□□□ 0.24
CBX3-204ENST00000456948 APLNQ9ULZ1 77 aa16.53■□□□□ 0.24
CBX3-204ENST00000456948 IGKV2-40A0A087WW87 121 aaPredicted RBP16.52■□□□□ 0.24
CBX3-204ENST00000456948 TRBV7-9A0A0J9YWB2 115 aa16.52■□□□□ 0.24
CBX3-204ENST00000456948 ARPC5O15511 151 aa16.52■□□□□ 0.24
CBX3-204ENST00000456948 IGKV2D-40P01614 121 aaPredicted RBP16.52■□□□□ 0.24
CBX3-204ENST00000456948 AZU1P20160 251 aa16.52■□□□□ 0.24
CBX3-204ENST00000456948 ZNF138P52744 262 aa16.52■□□□□ 0.24
CBX3-204ENST00000456948 RPL7L1Q6DKI1 246 aaKnown RBP16.52■□□□□ 0.24
CBX3-204ENST00000456948 ARL6IP6Q8N6S5 226 aa16.52■□□□□ 0.24
CBX3-204ENST00000456948 HYLS1Q96M11 299 aa16.52■□□□□ 0.24
CBX3-204ENST00000456948 ZNF492Q9P255 531 aa16.52■□□□□ 0.24
CBX3-204ENST00000456948 PGPA6NDG6 321 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 PRM2P04554 102 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 HTN3P15516 51 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 CRISP2P16562 243 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 RNASE4P34096 147 aaKnown RBP16.51■□□□□ 0.23
CBX3-204ENST00000456948 KIR3DS1Q14943 382 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 RAB24Q969Q5 203 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 VGLL1Q99990 258 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 ALMS1Q8TCU4 4167 aa16.51■□□□□ 0.23
CBX3-204ENST00000456948 SNURFLB1AK76 121 aa16.5■□□□□ 0.23
CBX3-204ENST00000456948 KLLNB2CW77 178 aa16.5■□□□□ 0.23
CBX3-204ENST00000456948 HMGB3O15347 200 aaKnown RBP16.5■□□□□ 0.23
CBX3-204ENST00000456948 STAG3L2P0CL84 134 aa16.5■□□□□ 0.23
CBX3-204ENST00000456948 STAG3L3P0CL85 134 aa16.5■□□□□ 0.23
CBX3-204ENST00000456948 DEFB130BP0DP73 79 aa16.5■□□□□ 0.23
CBX3-204ENST00000456948 DEFB130AP0DP74 79 aa16.5■□□□□ 0.23
CBX3-204ENST00000456948 DIRC3C9JPN6 131 aa16.49■□□□□ 0.23
CBX3-204ENST00000456948 CXorf1O96002 111 aa16.49■□□□□ 0.23
CBX3-204ENST00000456948 ARL14EPLP0DKL9 152 aa16.49■□□□□ 0.23
CBX3-204ENST00000456948 RNASE8Q8TDE3 154 aaKnown RBP16.49■□□□□ 0.23
CBX3-204ENST00000456948 FAM19A4Q96LR4 140 aa16.49■□□□□ 0.23
CBX3-204ENST00000456948 TMEM167BQ9NRX6 74 aa16.49■□□□□ 0.23
CBX3-204ENST00000456948 PLA2G2EQ9NZK7 142 aa16.49■□□□□ 0.23
CBX3-204ENST00000456948 AKR1C8PQ5T2L2 129 aa16.48■□□□□ 0.23
CBX3-204ENST00000456948 ZNF680Q8NEM1 530 aa16.48■□□□□ 0.23
CBX3-204ENST00000456948 SH3BGRL3Q9H299 93 aa16.48■□□□□ 0.23
CBX3-204ENST00000456948 LENEPQ9Y5L5 61 aa16.48■□□□□ 0.23
CBX3-204ENST00000456948 EIF3GO75821 320 aaKnown RBP eCLIP16.47■□□□□ 0.23
CBX3-204ENST00000456948 TMED6Q8WW62 240 aa16.47■□□□□ 0.23
CBX3-204ENST00000456948 NOP10Q9NPE3 64 aaKnown RBP16.47■□□□□ 0.23
CBX3-204ENST00000456948 CBY3A6NI87 242 aa16.46■□□□□ 0.23
CBX3-204ENST00000456948 K7EQM0 130 aa16.46■□□□□ 0.23
CBX3-204ENST00000456948 P0DMU3 169 aa16.46■□□□□ 0.23
CBX3-204ENST00000456948 FAM231AP0DMU4 169 aa16.46■□□□□ 0.23
CBX3-204ENST00000456948 FAM231CP0DMU5 169 aa16.46■□□□□ 0.23
CBX3-204ENST00000456948 GCHFRP30047 84 aa16.46■□□□□ 0.23
CBX3-204ENST00000456948 EIF4E3Q8N5X7 224 aaKnown RBP16.46■□□□□ 0.23
CBX3-204ENST00000456948 LINC00467Q9BRT7 94 aa16.46■□□□□ 0.23
CBX3-204ENST00000456948 SERTM2A0A1B0GWG4 89 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 PLAC8L1A1L4L8 177 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 HMSDA8MTL9 139 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 G3V3Q6 166 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 RGS13O14921 159 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 ATP5G1P05496 136 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 ATP5G3P48201 142 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 CD300CQ08708 224 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 BTN1A1Q13410 526 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 ZNF345Q14585 488 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 IQCF2Q8IXL9 164 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 ST6GAL2Q96JF0 529 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 ARPC5LQ9BPX5 153 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 RPH3ALQ9UNE2 315 aa16.45■□□□□ 0.22
CBX3-204ENST00000456948 A0A0D9SG52 128 aa16.44■□□□□ 0.22
CBX3-204ENST00000456948 ZNF324O75467 553 aaPredicted RBP16.44■□□□□ 0.22
CBX3-204ENST00000456948 CTXND1A0A1B0GTU2 59 aa16.43■□□□□ 0.22
CBX3-204ENST00000456948 SMLR1H3BR10 107 aa16.43■□□□□ 0.22
CBX3-204ENST00000456948 ANXA2RQ3ZCQ2 193 aa16.43■□□□□ 0.22
CBX3-204ENST00000456948 ZFAND2AQ8N6M9 145 aa16.43■□□□□ 0.22
CBX3-204ENST00000456948 Q8TAT8 98 aa16.43■□□□□ 0.22
CBX3-204ENST00000456948 F5H768 121 aa16.42■□□□□ 0.22
CBX3-204ENST00000456948 EIF5AP63241 154 aaKnown RBP16.42■□□□□ 0.22
CBX3-204ENST00000456948 GOLT1AQ6ZVE7 132 aa16.42■□□□□ 0.22
CBX3-204ENST00000456948 KCNRGQ8N5I3 272 aa16.42■□□□□ 0.22
CBX3-204ENST00000456948 C15orf53Q8NAA6 179 aa16.42■□□□□ 0.22
CBX3-204ENST00000456948 C5orf17Q8NAS9 161 aa16.42■□□□□ 0.22
CBX3-204ENST00000456948 SUN5Q8TC36 379 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms