RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 ZNF682O95780 498 aa2.53□□□□□ -2
CUL3-208ENST00000454323 IGKV1-5P01602 117 aa2.53□□□□□ -2
CUL3-208ENST00000454323 ALDH3A1P30838 453 aa2.53□□□□□ -2
CUL3-208ENST00000454323 S100A7P31151 101 aa2.53□□□□□ -2
CUL3-208ENST00000454323 CCL20P78556 96 aa2.53□□□□□ -2
CUL3-208ENST00000454323 NNATQ16517 81 aa2.53□□□□□ -2
CUL3-208ENST00000454323 MIAQ16674 131 aa2.53□□□□□ -2
CUL3-208ENST00000454323 PCBD2Q9H0N5 130 aa2.53□□□□□ -2
CUL3-208ENST00000454323 C11orf68Q9H3H3 251 aaKnown RBP2.53□□□□□ -2
CUL3-208ENST00000454323 IL36BQ9NZH7 164 aa2.53□□□□□ -2
CUL3-208ENST00000454323 TP73-AS1Q9UF72 201 aa2.53□□□□□ -2
CUL3-208ENST00000454323 RBM7Q9Y580 266 aaKnown RBP2.53□□□□□ -2
CUL3-208ENST00000454323 HERC2O95714 4834 aa2.53□□□□□ -2
CUL3-208ENST00000454323 RYR2Q92736 4967 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 STAB2Q8WWQ8 2551 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 A0A0J9YX75 114 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 ODF3BA8MYP8 253 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 GNRH2O43555 120 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 IGKV1-17P01599 117 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 CLPSP04118 112 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 CTSGP08311 255 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 FREM3P0C091 2139 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 P0C880 135 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 KDELR1P24390 212 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 RPL22P35268 128 aaKnown RBP2.52□□□□□ -2.01
CUL3-208ENST00000454323 HBA1P69905 142 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 AKR1C1Q04828 323 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 OR11H6Q8NGC7 330 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 OR4C16Q8NGL9 310 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 NEK7Q8TDX7 302 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 HOPXQ9BPY8 73 aaPredicted RBP2.52□□□□□ -2.01
CUL3-208ENST00000454323 DYNLRB1Q9NP97 96 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 GID8Q9NWU2 228 aa2.52□□□□□ -2.01
CUL3-208ENST00000454323 IGKV1D-17A0A075B6S4 117 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 C11orf86A6NJI1 115 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 PRM2P04554 102 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 FABP1P07148 127 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 C8GP07360 202 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 DSCR4P56555 118 aaPredicted RBP2.51□□□□□ -2.01
CUL3-208ENST00000454323 HSPE1P61604 102 aaKnown RBP2.51□□□□□ -2.01
CUL3-208ENST00000454323 PLCXD2Q0VAA5 305 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 AGTRAPQ6RW13 159 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 TMPPEQ6ZT21 453 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 TCF24Q7RTU0 167 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 DEFB108BQ8NET1 73 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 POP5Q969H6 163 aaKnown RBP2.51□□□□□ -2.01
CUL3-208ENST00000454323 TOMM6Q96B49 74 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 VCX3BQ9H321 246 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 CMYA5Q8N3K9 4069 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 COL7A1Q02388 2944 aa2.51□□□□□ -2.01
CUL3-208ENST00000454323 DYNC2H1Q8NCM8 4307 aaKnown RBP2.51□□□□□ -2.01
CUL3-208ENST00000454323 hCG_1818297A0A087WSY0 165 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 A8MT66 165 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 CST8O60676 142 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 RBP1P09455 135 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 OR4E1P0C645 316 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 RPS3P23396 243 aaKnown RBP eCLIP2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST1H2BOP23527 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST1H2BBP33778 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST1H2BDP58876 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST1H2BCP62807 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 FOXF1Q12946 379 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST2H2BEQ16778 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 DEFB112Q30KQ8 113 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.5□□□□□ -2.01
CUL3-208ENST00000454323 IBA57Q5T440 356 aaKnown RBP2.5□□□□□ -2.01
CUL3-208ENST00000454323 OR4S1Q8NGB4 309 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 GNPDA2Q8TDQ7 276 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 SLC7A6Q92536 515 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST1H2BHQ93079 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST1H2BNQ99877 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HIST1H2BMQ99879 126 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 DERL1Q9BUN8 251 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 PARVBQ9HBI1 364 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 MED11Q9P086 117 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 PSORS1C2Q9UIG4 136 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 HEATR5AQ86XA9 2040 aa2.5□□□□□ -2.01
CUL3-208ENST00000454323 TRAV9-1A0A075B6T8 112 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 A0A0J9YW62 118 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 SNRNP200O75643 2136 aaKnown RBP2.49□□□□□ -2.01
CUL3-208ENST00000454323 PROSCO94903 275 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 C1QBP02746 253 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 UCHL1P09936 223 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 TFPTP0C1Z6 253 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 HLA-DMBP28068 263 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 RPL18Q07020 188 aaKnown RBP2.49□□□□□ -2.01
CUL3-208ENST00000454323 AADACL3Q5VUY0 350 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 RPL22L1Q6P5R6 122 aaKnown RBP2.49□□□□□ -2.01
CUL3-208ENST00000454323 GOLT1AQ6ZVE7 132 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 LHFPL1Q86WI0 220 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 DYNAPQ8N1N2 210 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 ACOT12Q8WYK0 555 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 H1FXQ92522 213 aaKnown RBP2.49□□□□□ -2.01
CUL3-208ENST00000454323 AIF1LQ9BQI0 150 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 CCDC90BQ9GZT6 254 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 CENPHQ9H3R5 247 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 CYSLTR1Q9Y271 337 aa2.49□□□□□ -2.01
CUL3-208ENST00000454323 DNAH1Q9P2D7 4330 aa2.48□□□□□ -2.01
CUL3-208ENST00000454323 RYR1P21817 5038 aa2.48□□□□□ -2.01
CUL3-208ENST00000454323 PGRMC1O00264 195 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms