RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 KCNIP2Q9NS61 270 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 HSPB11Q9Y547 144 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 HECTD4Q9Y4D8 3996 aa11.52□□□□□ -0.56
NCKIPSD-208ENST00000454134 C7orf71A4D174 169 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 LINC00477Q96M19 166 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 VGLL1Q99990 258 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 PYGO2Q9BRQ0 406 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 PAXXQ9BUH6 204 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 FUT9Q9Y231 359 aa11.52□□□□□ -0.57
NCKIPSD-208ENST00000454134 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 KLLNB2CW77 178 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 C17orf112F2Z3M2 114 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 PET100P0DJ07 73 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 RPL12P30050 165 aaKnown RBP11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 RNASE4P34096 147 aaKnown RBP11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 OR5I1Q13606 314 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 LINC00612Q8N6U2 182 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 PHYHIPLQ96FC7 376 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 FAM19A4Q96LR4 140 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 MBD2Q9UBB5 411 aa11.51□□□□□ -0.57
NCKIPSD-208ENST00000454134 A0A1B0GVY2 172 aa11.5□□□□□ -0.57
NCKIPSD-208ENST00000454134 OR7C2O60412 319 aa11.5□□□□□ -0.57
NCKIPSD-208ENST00000454134 EIF3GO75821 320 aaKnown RBP eCLIP11.5□□□□□ -0.57
NCKIPSD-208ENST00000454134 C9orf47Q6ZRZ4 202 aa11.5□□□□□ -0.57
NCKIPSD-208ENST00000454134 ZNF503Q96F45 646 aa11.5□□□□□ -0.57
NCKIPSD-208ENST00000454134 GSN-AS1Q9NRJ2 163 aa11.5□□□□□ -0.57
NCKIPSD-208ENST00000454134 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 IFNA5P01569 189 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 GPX1P07203 203 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 HOXA5P20719 270 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 PRR9Q5T870 116 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 Q6ZQT7 251 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 Q6ZTI0 123 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 ZFAND2AQ8N6M9 145 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 SCGB1C1Q8TD33 95 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 WFDC1Q9HC57 220 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 BATF3Q9NR55 127 aa11.49□□□□□ -0.57
NCKIPSD-208ENST00000454134 DNAH2Q9P225 4427 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 A0A0J9YY99 117 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 CRISP2P16562 243 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 RANP62826 216 aaKnown RBP11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 C11orf72Q8NBR9 251 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 Q8TAT8 98 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
NCKIPSD-208ENST00000454134 M6PRP20645 277 aa11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 FAM3BP58499 235 aaPredicted RBP11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 UBE2L3P68036 154 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 DAZ2Q13117 558 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 ZNRF2Q8NHG8 242 aa11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 GNPNAT1Q96EK6 184 aaPredicted RBP11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 Q9H3A6 140 aa11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 ZNF492Q9P255 531 aa11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
NCKIPSD-208ENST00000454134 FAT2Q9NYQ8 4349 aa11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 ZNF138P52744 262 aa11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 CCL18P55774 89 aa11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 C1orf134Q5TEV5 83 aa11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 ZNF680Q8NEM1 530 aa11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 TP53TG3Q9ULZ0 132 aa11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
NCKIPSD-208ENST00000454134 NMBP08949 121 aa11.45□□□□□ -0.58
NCKIPSD-208ENST00000454134 CSN1S1P47710 185 aa11.45□□□□□ -0.58
NCKIPSD-208ENST00000454134 ANXA2RQ3ZCQ2 193 aa11.45□□□□□ -0.58
NCKIPSD-208ENST00000454134 KHDC3LQ587J8 217 aa11.45□□□□□ -0.58
NCKIPSD-208ENST00000454134 RXFP4Q8TDU9 374 aa11.45□□□□□ -0.58
NCKIPSD-208ENST00000454134 LINC00467Q9BRT7 94 aa11.45□□□□□ -0.58
NCKIPSD-208ENST00000454134 DNAH17Q9UFH2 4485 aa11.45□□□□□ -0.58
NCKIPSD-208ENST00000454134 TRGV2A0A075B6R0 118 aa11.44□□□□□ -0.58
NCKIPSD-208ENST00000454134 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
NCKIPSD-208ENST00000454134 RGS13O14921 159 aa11.44□□□□□ -0.58
NCKIPSD-208ENST00000454134 TAS2R45P59539 299 aa11.44□□□□□ -0.58
NCKIPSD-208ENST00000454134 SOHLH1Q5JUK2 328 aa11.44□□□□□ -0.58
NCKIPSD-208ENST00000454134 SSX7Q7RTT5 188 aa11.44□□□□□ -0.58
NCKIPSD-208ENST00000454134 HYLS1Q96M11 299 aa11.44□□□□□ -0.58
NCKIPSD-208ENST00000454134 IGHV1OR15-1A0A075B7D0 117 aa11.43□□□□□ -0.58
NCKIPSD-208ENST00000454134 NBDYA0A0U1RRE5 68 aa11.43□□□□□ -0.58
NCKIPSD-208ENST00000454134 TCL1AP56279 114 aa11.43□□□□□ -0.58
NCKIPSD-208ENST00000454134 RAB2AP61019 212 aa11.43□□□□□ -0.58
NCKIPSD-208ENST00000454134 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
NCKIPSD-208ENST00000454134 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
NCKIPSD-208ENST00000454134 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
NCKIPSD-208ENST00000454134 ACOT6Q3I5F7 207 aaPredicted RBP11.42□□□□□ -0.58
NCKIPSD-208ENST00000454134 MUC21Q5SSG8 566 aa11.42□□□□□ -0.58
NCKIPSD-208ENST00000454134 MRPL16Q9NX20 251 aaKnown RBP11.42□□□□□ -0.58
NCKIPSD-208ENST00000454134 RPH3ALQ9UNE2 315 aa11.42□□□□□ -0.58
NCKIPSD-208ENST00000454134 A0A1W2PPV4 95 aa11.41□□□□□ -0.58
NCKIPSD-208ENST00000454134 RBAKDNA6NC62 111 aa11.41□□□□□ -0.58
NCKIPSD-208ENST00000454134 SPINK4O60575 86 aa11.41□□□□□ -0.58
NCKIPSD-208ENST00000454134 PTTG1O95997 202 aa11.41□□□□□ -0.58
NCKIPSD-208ENST00000454134 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms