RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 MGLLQ99685 303 aa2.31□□□□□ -2.04
HMGB1P15-201ENST00000453854 GGACTQ9BVM4 153 aa2.31□□□□□ -2.04
HMGB1P15-201ENST00000453854 CACYBPQ9HB71 228 aaKnown RBP2.31□□□□□ -2.04
HMGB1P15-201ENST00000453854 SLC39A9Q9NUM3 307 aa2.31□□□□□ -2.04
HMGB1P15-201ENST00000453854 TRAPPC2LQ9UL33 140 aa2.31□□□□□ -2.04
HMGB1P15-201ENST00000453854 ZNF835Q9Y2P0 537 aa2.31□□□□□ -2.04
HMGB1P15-201ENST00000453854 ICOSQ9Y6W8 199 aa2.31□□□□□ -2.04
HMGB1P15-201ENST00000453854 F5P12259 2224 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 IGLV3-16A0A075B6K0 115 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 A0A087X0T9 212 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 A6NED7 52 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 ZNF860A6NHJ4 632 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 BUB1B-PAK6H3BSN5 160 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 GABARAPH6UMI1 98 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 M0R2Z0 102 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 LEPROTO15243 131 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 CDS2O95674 445 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 SOD1P00441 154 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 TRGV3P03979 118 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 TSPAN19P0C672 248 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 LGALS3P17931 250 aaKnown RBP2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 FKBP2P26885 142 aaKnown RBP2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 SRP14P37108 136 aaKnown RBP2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 NDUFA6P56556 154 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 UBE2BP63146 152 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 MEF2BQ02080 365 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 ZNF816Q0VGE8 651 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 MSMO1Q15800 293 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 VMA21Q3ZAQ7 101 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 LINC01554Q52M75 96 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 OR5C1Q8NGR4 320 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 OR4C6Q8NH72 309 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 PPTC7Q8NI37 304 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 ARL11Q969Q4 196 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 RBMXL1Q96E39 390 aaKnown RBP2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 LXNQ9BS40 222 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 PRADC1Q9BSG0 188 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 OR8D2Q9GZM6 311 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 SMDT1Q9H4I9 107 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 KLK12Q9UKR0 248 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 ERG28Q9UKR5 140 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 RBM7Q9Y580 266 aaKnown RBP2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 OBSL1O75147 1896 aa2.3□□□□□ -2.04
HMGB1P15-201ENST00000453854 PCM1Q15154 2024 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MYH9P35579 1960 aaKnown RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 EML6Q6ZMW3 1958 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 IGKV1OR2-108A0A075B7D4 117 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MEIKINA0A087WXM9 373 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 A0A0D9SEW6 157 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 GGT3PA6NGU5 568 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 J3QQQ9 107 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 M0R378 163 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 CST7O76096 145 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 LY6HO94772 140 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 NCR2O95944 276 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 IGHV1-69P01742 117 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 IGHV3-7P01780 117 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 CD52P31358 61 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 RRAS2P62070 204 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 EIF5AP63241 154 aaKnown RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 HIST1H1AQ02539 215 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 SLC38A11Q08AI6 406 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MIAQ16674 131 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 ZNF322Q6U7Q0 402 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 Q6ZS52 159 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MIR17HGQ75NE6 70 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 RPP25LQ8N5L8 163 aaKnown RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 CNEP1R1Q8N9A8 125 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 ST20-AS1Q8NBB2 130 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 TSTD1Q8NFU3 115 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 TERB2Q8NHR7 220 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MUC7Q8TAX7 377 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 C12orf57Q99622 126 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 OR5V1Q9UGF6 321 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MCTS1Q9ULC4 181 aaKnown RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 HS3ST2Q9Y278 367 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 ABCA2Q9BZC7 2435 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MED13Q9UHV7 2174 aa2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 ZFC3H1O60293 1989 aaKnown RBP2.29□□□□□ -2.04
HMGB1P15-201ENST00000453854 MTORP42345 2549 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 IGHV1-58A0A0C4DH39 117 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 LOC107984640A0A0U1RRK4 108 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 A8MUU9 505 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 C1orf196B1AJZ1 125 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 ATP6V1G2-DDX39BF2Z307 99 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 H3BQ85 93 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 LY6LH3BQJ8 138 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 IGHV3-53P01767 116 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 IL4P05112 153 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 MSMBP08118 114 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 SMIM6P0DI80 62 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 CD24P25063 80 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 SDC2P34741 201 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 RAB5CP51148 216 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 INSL3P51460 131 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 TMBIM6P55061 237 aa2.28□□□□□ -2.04
HMGB1P15-201ENST00000453854 AMMECR1LQ6DCA0 310 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms