RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 C5orf63A6NC05 138 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 SPINK4O60575 86 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC00271P0C7V0 271 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 IAPPP10997 89 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 DEFA4P12838 97 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 CD164Q04900 197 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 SPANXN5Q5MJ07 72 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 Q6ZRU5 148 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC00643Q86TS7 51 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 PRR26Q8N8Z3 221 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 LYZL4Q96KX0 146 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 BMFQ96LC9 184 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 SPACA5Q96QH8 159 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 MGST2Q99735 147 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 CYSTM1Q9H1C7 97 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 RPP21Q9H633 154 aaKnown RBP2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 TAC3Q9UHF0 121 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 EPDR1Q9UM22 224 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 F11RQ9Y624 299 aaKnown RBP2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 C2orf16Q68DN1 1984 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 MYO7BQ6PIF6 2116 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 DYSFO75923 2080 aa2.77□□□□□ -1.97
HMGB3P8-201ENST00000449709 TANC2Q9HCD6 1990 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRGV5A0A0B4J1U4 118 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 FAM236DA0A1B0GTK5 79 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 TMEM89A2RUT3 159 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC01549A6NIU2 74 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 CDX4O14627 284 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 CHEK1O14757 476 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRACP01848 142 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF883P0CG24 379 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 FAM236CP0DP71 79 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 COX6A1P12074 109 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 COX6B1P14854 86 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 LIFP15018 202 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 PRDX2P32119 198 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 SSR4P51571 173 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 B3GALT5-AS1P59052 145 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGLV3-21P80748 117 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 TMEM52BQ4KMG9 183 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 MORN5Q5VZ52 161 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 CEMP1Q6PRD7 247 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF497Q6ZNH5 498 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC00311Q8N616 119 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 C3orf56Q8N813 242 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 MAPKAPK5-AS1Q8N8E1 139 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF524Q96C55 264 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 DPH3P1Q9H4G8 78 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF442Q9H7R0 627 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 CCL28Q9NRJ3 127 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 OCIAD1Q9NX40 245 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 SERP1Q9Y6X1 66 aa2.76□□□□□ -1.97
HMGB3P8-201ENST00000449709 CACNA1CQ13936 2221 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGKV1-27A0A075B6S5 117 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRAV8-1A0A0A6YYK1 113 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGKV1D-43A0A0B4J1Z2 117 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRAV13-1A0A0B4J241 112 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRAV12-1A0A0B4J245 112 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRGV8A0A0C4DH27 118 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGKV1-12A0A0C4DH73 117 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 A0A0J9YW62 118 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 H3BMM0 161 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 MRPS12O15235 138 aaKnown RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZFAND5O76080 213 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 NDUFC2O95298 119 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGKV1D-12P01611 117 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF823P16415 610 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 FKBP2P26885 142 aaKnown RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 DUTP33316 252 aaKnown RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 TNFRSF4P43489 277 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 PSMB2P49721 201 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 GFERP55789 205 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 RPS18P62269 152 aaKnown RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 FKBP1BP68106 108 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 CCL8P80075 99 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 IZUMO4Q1ZYL8 232 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC01620Q4KN68 170 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGFL2Q6UWQ7 119 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 FP248Q71RG6 208 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 VN1R4Q7Z5H5 301 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 TDHQ8IZJ6 230 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 SERP2Q8N6R1 65 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 Q8N8P6 123 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 NTN5Q8WTR8 489 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 ITLN1Q8WWA0 313 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 TSACCQ96A04 125 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 UBE2WQ96B02 151 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 FAM167A-AS1Q96KT0 104 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 FAM173AQ9BQD7 235 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 ZNF355PQ9NSJ1 428 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 DEPPQ9NTK1 212 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 CALYQ9NYX4 217 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 LINC00527Q9UJ94 153 aa2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 KLF13Q9Y2Y9 288 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 AMMECR1Q9Y4X0 333 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P8-201ENST00000449709 IGLV5-37A0A075B6J1 123 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 SMIM26A0A096LP01 95 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 A0A0B4J2C4 111 aa2.74□□□□□ -1.97
HMGB3P8-201ENST00000449709 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms