RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
PTPRE-203ENST00000442830 C2orf50Q96LR7 162 aa9.53□□□□□ -0.88
PTPRE-203ENST00000442830 PARD6GQ9BYG4 376 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-203ENST00000442830 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
PTPRE-203ENST00000442830 SCRT2Q9NQ03 307 aa9.53□□□□□ -0.88
PTPRE-203ENST00000442830 LYRM2Q9NU23 88 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-203ENST00000442830 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
PTPRE-203ENST00000442830 ZNF586Q9NXT0 402 aa9.53□□□□□ -0.88
PTPRE-203ENST00000442830 FUT9Q9Y231 359 aa9.53□□□□□ -0.88
PTPRE-203ENST00000442830 A0A096LPF7 62 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 TRGV1A0A0A0MS02 117 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 TRBV7-9A0A0J9YWB2 115 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 FAM25EA8MYX2 175 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 H3BTX0 84 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 CST7O76096 145 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 SNRPCP09234 159 aaKnown RBP9.52□□□□□ -0.89
PTPRE-203ENST00000442830 IL7P13232 177 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 CRISP2P16562 243 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 TMEM78Q5T7P6 136 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 C9orf47Q6ZRZ4 202 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 C11orf72Q8NBR9 251 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 ST6GAL2Q96JF0 529 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 GSN-AS1Q9NRJ2 163 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 KCNIP2Q9NS61 270 aa9.52□□□□□ -0.89
PTPRE-203ENST00000442830 TRAV9-2A0A087WT02 112 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 UBE2L5PA0A1B0GUS4 154 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 RGS13O14921 159 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 PAX4O43316 350 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 LYRM1O43325 122 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-203ENST00000442830 GPX1P07203 203 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 LINC00315P59091 139 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 ERVFC1-1P60608 527 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 VSIG2Q96IQ7 327 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 FAM19A4Q96LR4 140 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 ARPC5LQ9BPX5 153 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 PRO0255Q9UI72 69 aa9.51□□□□□ -0.89
PTPRE-203ENST00000442830 TRAV5A0A0B4J249 113 aa9.5□□□□□ -0.89
PTPRE-203ENST00000442830 CCSO14618 274 aa9.5□□□□□ -0.89
PTPRE-203ENST00000442830 SPINK4O60575 86 aa9.5□□□□□ -0.89
PTPRE-203ENST00000442830 TCRBP04435 133 aa9.5□□□□□ -0.89
PTPRE-203ENST00000442830 SDHCQ99643 169 aaPredicted RBP9.5□□□□□ -0.89
PTPRE-203ENST00000442830 VGLL1Q99990 258 aa9.5□□□□□ -0.89
PTPRE-203ENST00000442830 FAM24AA6NFZ4 105 aa9.49□□□□□ -0.89
PTPRE-203ENST00000442830 PRB4P10163 310 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-203ENST00000442830 FGF7P21781 194 aa9.49□□□□□ -0.89
PTPRE-203ENST00000442830 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
PTPRE-203ENST00000442830 S100A10P60903 97 aa9.49□□□□□ -0.89
PTPRE-203ENST00000442830 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
PTPRE-203ENST00000442830 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
PTPRE-203ENST00000442830 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
PTPRE-203ENST00000442830 C11orf1Q9H5F2 150 aa9.49□□□□□ -0.89
PTPRE-203ENST00000442830 M0R3E3 92 aa9.48□□□□□ -0.89
PTPRE-203ENST00000442830 NXPH4O95158 308 aa9.48□□□□□ -0.89
PTPRE-203ENST00000442830 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
PTPRE-203ENST00000442830 BTN1A1Q13410 526 aa9.48□□□□□ -0.89
PTPRE-203ENST00000442830 MRPL32Q9BYC8 188 aaKnown RBP9.48□□□□□ -0.89
PTPRE-203ENST00000442830 AGPAT4-IT1Q9H0P7 198 aa9.48□□□□□ -0.89
PTPRE-203ENST00000442830 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-203ENST00000442830 NUDT15Q9NV35 164 aa9.48□□□□□ -0.89
PTPRE-203ENST00000442830 IGHV1OR15-1A0A075B7D0 117 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 RBAKDNA6NC62 111 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 NDUFB4O95168 129 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 CSN1S1P47710 185 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 CD300CQ08708 224 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 ERCC8Q13216 396 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 Q6ZRN7 208 aaPredicted RBP9.47□□□□□ -0.89
PTPRE-203ENST00000442830 NEGR1Q7Z3B1 354 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 NPCDR1Q9BY65 106 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 SLC25A31Q9H0C2 315 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 ZNF492Q9P255 531 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 KLF12Q9Y4X4 402 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
PTPRE-203ENST00000442830 APOBP04114 4563 aaKnown RBP9.46□□□□□ -0.89
PTPRE-203ENST00000442830 TRAV6A0A075B6T7 132 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 IGSF23A1L1A6 192 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 EPM2AB3EWF7 344 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 ORM1P02763 201 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 RAB32Q13637 225 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 ICAM4Q14773 271 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 LYPD1Q8N2G4 141 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 PCNPQ8WW12 178 aaKnown RBP9.46□□□□□ -0.9
PTPRE-203ENST00000442830 CCDC32Q9BV29 185 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 LY96Q9Y6Y9 160 aa9.46□□□□□ -0.9
PTPRE-203ENST00000442830 C17orf112F2Z3M2 114 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 PLA2G10O15496 165 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 IFNA5P01569 189 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 H2AFB2P0C5Z0 115 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 PYYP10082 97 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 ZNF138P52744 262 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 CRYBA4P53673 196 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 SH2D6Q7Z4S9 175 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 IQCF2Q8IXL9 164 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
PTPRE-203ENST00000442830 ZFAND2AQ8N6M9 145 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms