RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 LINC00527Q9UJ94 153 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 CSAG2Q9Y5P2 127 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 FANCMQ8IYD8 2048 aa3.59□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZNF318Q5VUA4 2279 aa3.59□□□□□ -1.84
HMGB3P9-201ENST00000441799 CACNA1HO95180 2353 aa3.59□□□□□ -1.84
HMGB3P9-201ENST00000441799 PLXNA3P51805 1871 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZFYVE26Q68DK2 2539 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 A0A087WZ39 114 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 TRAV8-3A0A0A6YYJ7 113 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 TRAV2A0A0B4J234 112 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 TRAV17A0A0B4J275 112 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGHV3OR16-9A0A0B4J2B5 98 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 hADV29S1A0JD25 119 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 C2orf70A6NJV1 201 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 C15orf62A8K5M9 175 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 INS-IGF2F8WCM5 200 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF73O43830 326 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 HLA-DQA1P01909 254 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 AQP1P29972 269 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 NANOS2P60321 138 aaKnown RBP3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 ERVK-16P61578 105 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 SNRPD3P62318 126 aaKnown RBP3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 CACNG7P62955 275 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 TWIST1Q15672 202 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 ABCA11PQ4W5N1 156 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 CLLU1OSQ5K130 101 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 FAM219BQ5XKK7 198 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 Q6P435 159 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 LCA10Q71F78 164 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 OR8A1Q8NGG7 326 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 CLDND2Q8NHS1 167 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 ESM1Q9NQ30 184 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 CMC2Q9NRP2 79 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 NLRC5Q86WI3 1866 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 VWA8A3KMH1 1905 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 PTPRDP23468 1912 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 DOCK4Q8N1I0 1966 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 SCN10AQ9Y5Y9 1956 aa3.58□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGKV1D-8A0A087WSZ0 117 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 TRBV5-3A0A0A0MS03 114 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 TRBV5-4A0A0C4DH59 114 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 EPOPA6NHQ4 379 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 LST1O00453 97 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 ASAH2BP0C7U1 165 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF883P0CG24 379 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 SCGB1C2P0DMR2 95 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 IL9P15248 144 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 CCL23P55773 120 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 CAV3P56539 151 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 DSCR4P56555 118 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 RSPO1Q2MKA7 263 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 ORMDL2Q53FV1 153 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 WDR38Q5JTN6 314 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 FRYQ5TBA9 3013 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 HMGN2P46Q86SG4 172 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 Q8N2B8 174 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 TMEM75Q8N9X5 138 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 MORN4Q8NDC4 146 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 NBEAQ8NFP9 2946 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 OR5C1Q8NGR4 320 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 GBF1Q92538 1859 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 FXYD5Q96DB9 178 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 C17orf77Q96MU5 243 aa3.57□□□□□ -1.84
HMGB3P9-201ENST00000441799 COL4A4P53420 1690 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 COL4A6Q14031 1691 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGHV1-24A0A0C4DH33 117 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 UBE2L5PA0A1B0GUS4 154 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 A8MUN3 132 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 M0R381 172 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 FSTL3O95633 263 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF823P16415 610 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 CD70P32970 193 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 SPINT3P49223 89 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 PSMB2P49721 201 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 UBE2L3P68036 154 aaKnown RBP3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 HBBP68871 147 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 PRR3P79522 188 aaKnown RBP3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 NSUN5P1Q3KNT7 163 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 TMEM155Q4W5P6 130 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 FAM19A3Q7Z5A8 133 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 LINC00596Q86U02 117 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF329Q86UD4 541 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 CLECL1Q8IZS7 167 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 LINC00337Q8N6G1 96 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 SERP2Q8N6R1 65 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF645Q8N7E2 425 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 FAM3DQ96BQ1 224 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 RNF185Q96GF1 192 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 SMIM14Q96QK8 99 aa3.56□□□□□ -1.84
HMGB3P9-201ENST00000441799 FAM208BQ5VWN6 2430 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 LAMA5O15230 3695 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 WDFY3Q8IZQ1 3526 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 TRBV20OR9-2A0A075B6H5 130 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms