RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 PCDH15Q96QU1 1955 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SDK1Q7Z5N4 2213 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 CACNA1IQ9P0X4 2223 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 CABIN1Q9Y6J0 2220 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LOC389332A0A1B0GUA5 103 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 INSL3P51460 131 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 MP68P56378 58 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LMO4P61968 165 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 FHL1Q13642 323 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 WFDC2Q14508 124 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LINC01590Q5TEZ4 76 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 UNQ9165/PRO28630Q6UXU0 137 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 Q6ZS92 163 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LINC00305Q7Z4B0 112 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ABCA7Q8IZY2 2146 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 NTN5Q8WTR8 489 aaPredicted RBP4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C18orf15Q96N68 181 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ZNF286AQ9HBT8 521 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SLC39A9Q9NUM3 307 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SPRR3Q9UBC9 169 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TMEM14AQ9Y6G1 99 aa4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 CHCHD2Q9Y6H1 151 aaPredicted RBP4.46□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 CPAMD8Q8IZJ3 1885 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV5-51A0A0C4DH38 117 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TMEM262E9PQX1 116 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 HLA-DQA1P01909 254 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 SMIM13P0DJ93 91 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 FHL2Q14192 279 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RRN3P1Q2M238 152 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C1orf140Q5VVS0 124 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 Q6ZS49 121 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LYZL2Q7Z4W2 148 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 DEFB119Q8N690 84 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ZNRF1Q8ND25 227 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RNF185Q96GF1 192 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C20orf78Q9BR46 151 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TM2D3Q9BRN9 247 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ASXL3Q9C0F0 2248 aa4.46□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 KIAA1549Q9HCM3 1950 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TMEM14DPA8MWL7 114 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 UQCRQO14949 82 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV3-7P01780 117 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV3-9P01782 118 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CECR9P0C854 216 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 DEFB133Q30KQ1 61 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ETDBQ3ZM63 59 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TMEM136Q6ZRR5 245 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C17orf82Q86X59 251 aaPredicted RBP4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 OR51H1Q8NH63 302 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RAB37Q96AX2 223 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 SRXN1Q9BYN0 137 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CEP192Q8TEP8 1941 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 A0A0G2JRQ6 117 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRBV7-6A0A0J9YX20 115 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CTXND1A0A1B0GTU2 59 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 UBE2L6O14933 153 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 NAPSAO96009 420 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PYYP10082 97 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C6orf99Q4VX62 202 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 AAED1Q7RTV5 226 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 Q8N3U1 123 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TMEM204Q9BSN7 226 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RABAC1Q9UI14 185 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TIMM9Q9Y5J7 89 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ALPK2Q86TB3 2170 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LAMA1P25391 3075 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CACNA1CQ13936 2221 aa4.45□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RALGAPA1Q6GYQ0 2036 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGKV1D-42A0A075B6H8 117 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRAV13-1A0A0B4J241 112 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 M0R381 172 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 BMPR1BO00238 502 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PSPHP1O15172 72 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 SSSCA1O60232 199 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CST7O76096 145 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRBV12-3P01733 135 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CLPSP04118 112 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PRSS1P07477 247 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 NMUP48645 174 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 SH2D6Q7Z4S9 175 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 GTSF1Q8WW33 167 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ZNF799Q96GE5 643 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TXNDC17Q9BRA2 123 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C21orf62Q9NYP8 219 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 XCL2Q9UBD3 114 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LY96Q9Y6Y9 160 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 GTF3C1Q12789 2109 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 DOCK11Q5JSL3 2073 aa4.44□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGKV3D-11A0A0A0MRZ8 115 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 H3BSH0 61 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 K7EQD1 137 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms