RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 UBE2G1P62253 170 aa15.64■□□□□ 0.09
VPS13B-204ENST00000441350 FLI1Q01543 452 aaPredicted RBP15.64■□□□□ 0.09
VPS13B-204ENST00000441350 EGFEM1PQ0D2K5 195 aa15.64■□□□□ 0.09
VPS13B-204ENST00000441350 ZNF124Q15973 351 aa15.64■□□□□ 0.09
VPS13B-204ENST00000441350 FAM74A3Q4VXF1 159 aa15.64■□□□□ 0.09
VPS13B-204ENST00000441350 APRG1Q8IVJ8 170 aa15.64■□□□□ 0.09
VPS13B-204ENST00000441350 HIST1H1AQ02539 215 aaPredicted RBP15.63■□□□□ 0.09
VPS13B-204ENST00000441350 EBLN2Q6P2I7 272 aa15.63■□□□□ 0.09
VPS13B-204ENST00000441350 IGF2BP2-AS1Q96M15 143 aa15.63■□□□□ 0.09
VPS13B-204ENST00000441350 LINC00477Q96M19 166 aa15.63■□□□□ 0.09
VPS13B-204ENST00000441350 PSG8Q9UQ74 426 aa15.63■□□□□ 0.09
VPS13B-204ENST00000441350 KNCNA6PVL3 124 aa15.62■□□□□ 0.09
VPS13B-204ENST00000441350 C10orf91Q5T1B1 145 aa15.62■□□□□ 0.09
VPS13B-204ENST00000441350 Q86TA4 180 aa15.62■□□□□ 0.09
VPS13B-204ENST00000441350 SEC11CQ9BY50 192 aa15.62■□□□□ 0.09
VPS13B-204ENST00000441350 PPP1R14DQ9NXH3 145 aa15.62■□□□□ 0.09
VPS13B-204ENST00000441350 AGRNO00468 2067 aa15.62■□□□□ 0.09
VPS13B-204ENST00000441350 C9JCJ5 164 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 F8W036 122 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 LTAP01374 205 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 CENPWQ5EE01 88 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 TMEM78Q5T7P6 136 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 SAMD5Q5TGI4 173 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 PRNTQ86SH4 94 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 HLA-DRB4P13762 266 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 ZNF138P52744 262 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 ACTL10Q5JWF8 245 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 GTSCR1Q86UQ5 136 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 Q8TAT8 98 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 ZNF492Q9P255 531 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 HLA-DRB4X5D2U9 266 aa15.61■□□□□ 0.09
VPS13B-204ENST00000441350 A8MTW9 85 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 KRBOX1C9JBD0 128 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 G3V4G9 280 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 H3BMM0 161 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 DUSP14O95147 198 aaKnown RBP15.6■□□□□ 0.09
VPS13B-204ENST00000441350 CT45A10P0DMU9 189 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 GNG4P50150 75 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 KRTAP10-11P60412 298 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 TVP23CQ96ET8 276 aa15.6■□□□□ 0.09
VPS13B-204ENST00000441350 IGLV2-8P01709 118 aa15.59■□□□□ 0.09
VPS13B-204ENST00000441350 BAGE2Q86Y30 109 aa15.59■□□□□ 0.09
VPS13B-204ENST00000441350 PRR25Q96S07 402 aa15.59■□□□□ 0.09
VPS13B-204ENST00000441350 ASCL2Q99929 193 aa15.59■□□□□ 0.09
VPS13B-204ENST00000441350 WFDC10AQ9H1F0 79 aa15.59■□□□□ 0.09
VPS13B-204ENST00000441350 ZFP30Q9Y2G7 519 aa15.59■□□□□ 0.09
VPS13B-204ENST00000441350 CARHSP1Q9Y2V2 147 aaKnown RBP15.59■□□□□ 0.09
VPS13B-204ENST00000441350 PGPEP1LA6NFU8 196 aa15.58■□□□□ 0.09
VPS13B-204ENST00000441350 TMEM241Q24JQ0 296 aa15.58■□□□□ 0.09
VPS13B-204ENST00000441350 Q8N1Y9 231 aa15.58■□□□□ 0.09
VPS13B-204ENST00000441350 FAM19A4Q96LR4 140 aa15.58■□□□□ 0.09
VPS13B-204ENST00000441350 MLST8Q9BVC4 326 aa15.58■□□□□ 0.09
VPS13B-204ENST00000441350 ZMAT5Q9UDW3 170 aaKnown RBP15.58■□□□□ 0.09
VPS13B-204ENST00000441350 NAT8Q9UHE5 227 aa15.58■□□□□ 0.09
VPS13B-204ENST00000441350 LENEPQ9Y5L5 61 aa15.58■□□□□ 0.09
VPS13B-204ENST00000441350 SAPCD1Q5SSQ6 148 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 TMEM183AQ8IXX5 376 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 CLUHP3Q96NS8 147 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 NIPSNAP3BQ9BS92 247 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 LY96Q9Y6Y9 160 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 TRBV7-9A0A0J9YWB2 115 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 AMTNQ6UX39 209 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 OR4B1Q8NGF8 309 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 OCC1Q8TAD7 63 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 SMIM12Q96EX1 92 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 ODF3Q96PU9 254 aa15.57■□□□□ 0.08
VPS13B-204ENST00000441350 COX8CQ7Z4L0 72 aa15.56■□□□□ 0.08
VPS13B-204ENST00000441350 NHLRC2Q8NBF2 726 aa15.56■□□□□ 0.08
VPS13B-204ENST00000441350 SDF2L1Q9HCN8 221 aa15.56■□□□□ 0.08
VPS13B-204ENST00000441350 ATP6V1G1O75348 118 aa15.55■□□□□ 0.08
VPS13B-204ENST00000441350 IGKV3-20P01619 116 aa15.55■□□□□ 0.08
VPS13B-204ENST00000441350 TRPT1Q86TN4 253 aaKnown RBP15.55■□□□□ 0.08
VPS13B-204ENST00000441350 LINC01551Q86U37 167 aa15.55■□□□□ 0.08
VPS13B-204ENST00000441350 DEFB125Q8N687 156 aa15.55■□□□□ 0.08
VPS13B-204ENST00000441350 C8orf49Q96NF6 230 aa15.55■□□□□ 0.08
VPS13B-204ENST00000441350 NDFIP1Q9BT67 221 aa15.55■□□□□ 0.08
VPS13B-204ENST00000441350 RBMY1BA6NDE4 496 aaKnown RBP15.54■□□□□ 0.08
VPS13B-204ENST00000441350 RBMY1EA6NEQ0 496 aaKnown RBP15.54■□□□□ 0.08
VPS13B-204ENST00000441350 RBMY1DP0C7P1 496 aaKnown RBP15.54■□□□□ 0.08
VPS13B-204ENST00000441350 CRISP2P16562 243 aa15.54■□□□□ 0.08
VPS13B-204ENST00000441350 STHQ8IWL8 128 aa15.54■□□□□ 0.08
VPS13B-204ENST00000441350 AURKAIP1Q9NWT8 199 aaPredicted RBP15.54■□□□□ 0.08
VPS13B-204ENST00000441350 MGAM2Q2M2H8 2515 aa15.54■□□□□ 0.08
VPS13B-204ENST00000441350 RPL23P62829 140 aaKnown RBP15.54■□□□□ 0.08
VPS13B-204ENST00000441350 ZFAND2AQ8N6M9 145 aa15.54■□□□□ 0.08
VPS13B-204ENST00000441350 DNAH3Q8TD57 4116 aa15.53■□□□□ 0.08
VPS13B-204ENST00000441350 K7EN84 100 aa15.53■□□□□ 0.08
VPS13B-204ENST00000441350 ZC2HC1AQ96GY0 325 aa15.53■□□□□ 0.08
VPS13B-204ENST00000441350 DNHD1Q96M86 4753 aa15.52■□□□□ 0.08
VPS13B-204ENST00000441350 PNRC1Q12796 327 aaPredicted RBP15.52■□□□□ 0.08
VPS13B-204ENST00000441350 GCGP01275 180 aa15.51■□□□□ 0.07
VPS13B-204ENST00000441350 APOC3P02656 99 aa15.51■□□□□ 0.07
VPS13B-204ENST00000441350 KPRPQ5T749 579 aaPredicted RBP15.51■□□□□ 0.07
VPS13B-204ENST00000441350 NBEAL1Q6ZS30 2694 aa15.51■□□□□ 0.07
VPS13B-204ENST00000441350 KLLNB2CW77 178 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 MGST1P10620 155 aaKnown RBP15.5■□□□□ 0.07
VPS13B-204ENST00000441350 LEPP41159 167 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 ADIRFQ15847 76 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 SMUG1Q53HV7 270 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 NOTCH1P46531 2555 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms