RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 RAB37Q96AX2 223 aa4.9□□□□□ -1.63
PUM1-207ENST00000440538 PGLYRP4Q96LB8 373 aa4.9□□□□□ -1.63
PUM1-207ENST00000440538 CHRDL1Q9BU40 450 aa4.9□□□□□ -1.63
PUM1-207ENST00000440538 TMEM70Q9BUB7 260 aa4.9□□□□□ -1.63
PUM1-207ENST00000440538 TRAV41A0A0B4J266 112 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 IGHV1-24A0A0C4DH33 117 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 A6NDX4 124 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 PPBPP02775 128 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 GPR183P32249 361 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 RHOGP84095 191 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 PRR20EP86478 221 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 PRR20CP86479 221 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 PRR20DP86480 221 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 PRR20BP86481 221 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 PRR20AP86496 221 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 SMIM15Q7Z3B0 74 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 TMEM167AQ8TBQ9 72 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 MPDU1O75352 247 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 CRLF1O75462 422 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 OR5B3Q8NH48 314 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 NPIPB3Q92617 1050 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 FOXA2Q9Y261 457 aaPredicted RBP4.89□□□□□ -1.63
PUM1-207ENST00000440538 FAM231BA6NCW3 169 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 OOSP1A8MZH6 123 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 SYS1-DBNDD2H3BUS1 97 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 NCR2O95944 276 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 UBE2L3P68036 154 aaKnown RBP4.89□□□□□ -1.63
PUM1-207ENST00000440538 C15orf32Q32M92 178 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 C8orf31Q8N9H6 132 aa4.89□□□□□ -1.63
PUM1-207ENST00000440538 NOTCH1P46531 2555 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 MGAM2Q2M2H8 2515 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 RPL11P62913 178 aaKnown RBP4.88□□□□□ -1.63
PUM1-207ENST00000440538 TM4SF20Q53R12 229 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 SLC25A34Q6PIV7 304 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 ZNF562Q6V9R5 426 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 Q6ZSV7 163 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.88□□□□□ -1.63
PUM1-207ENST00000440538 TXNDC17Q9BRA2 123 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 PSMB11A5LHX3 300 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 K7EMI3 77 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 LEPROTL1O95214 131 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 ORM2P19652 201 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 DEFB125Q8N687 156 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 JMJD8Q96S16 334 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 SLC25A2Q9BXI2 301 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 TMEM14BQ9NUH8 114 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 MRPL36Q9P0J6 103 aaKnown RBP4.88□□□□□ -1.63
PUM1-207ENST00000440538 ANK3Q12955 4377 aaKnown RBP4.88□□□□□ -1.63
PUM1-207ENST00000440538 CGB1A6NKQ9 187 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 TRBV12-3P01733 135 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 PRCDQ00LT1 54 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 FAM106AQ4KMX7 169 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 NBEAL1Q6ZS30 2694 aa4.88□□□□□ -1.63
PUM1-207ENST00000440538 A0A1W2PRE2 83 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 C7orf71A4D174 169 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 GNG7O60262 68 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 RAB31Q13636 194 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 OR1B1Q8NGR6 318 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 NDUFA4L2Q9NRX3 87 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 MRPL27Q9P0M9 148 aaKnown RBP4.87□□□□□ -1.63
PUM1-207ENST00000440538 LY96Q9Y6Y9 160 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 H3BUT2 72 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 CLEC3BP05452 202 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 SCGB2A2Q13296 93 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 FAM71F2Q6NXP2 309 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 GTSF1Q8WW33 167 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 TMEM167BQ9NRX6 74 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 TRAV8-1A0A0A6YYK1 113 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 GAGE10A6NGK3 116 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 FBLL1A6NHQ2 334 aaKnown RBP4.87□□□□□ -1.63
PUM1-207ENST00000440538 FAM90A9PA6NNJ1 464 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 TEX22C9J3V5 150 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 SUB1P53999 127 aaKnown RBP eCLIP4.87□□□□□ -1.63
PUM1-207ENST00000440538 LYZP61626 148 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 WFDC3Q8IUB2 231 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 SCRT2Q9NQ03 307 aa4.87□□□□□ -1.63
PUM1-207ENST00000440538 VWFP04275 2813 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 TCRBV4S1A1TA0A5B7 111 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 C8orf88P0DMB2 117 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 CD28P10747 220 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 MRGPRG-AS1Q2M3A8 158 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 KLHL30-AS1Q8NEE0 82 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 OR1N2Q8NGR9 330 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 GRAMD2BQ96HH9 432 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 FAM167A-AS1Q96KT0 104 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 HLA-DRB1P01911 266 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 RNASE2P10153 161 aaKnown RBP4.86□□□□□ -1.63
PUM1-207ENST00000440538 EGR2P11161 476 aaPredicted RBP4.86□□□□□ -1.63
PUM1-207ENST00000440538 HILS1P60008 231 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 PATE2Q6UY27 113 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 C8orf86Q6ZUL3 223 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 TEX29Q8N6K0 151 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 Q8N6K4 173 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 FER1L6-AS1Q8NA97 138 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 NPBQ8NG41 125 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 LINC01006Q8NI28 216 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 CITED2Q99967 270 aaPredicted RBP4.86□□□□□ -1.63
PUM1-207ENST00000440538 TPPP3Q9BW30 176 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 ZNF702PQ9H963 129 aa4.86□□□□□ -1.63
PUM1-207ENST00000440538 LOC389332A0A1B0GUA5 103 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms