RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 GFI1BQ5VTD9 330 aa7.47□□□□□ -1.21
MCF2L-216ENST00000439475 OR2G3Q8NGZ4 309 aa7.47□□□□□ -1.21
MCF2L-216ENST00000439475 TMEM263Q8WUH6 116 aaKnown RBP7.47□□□□□ -1.21
MCF2L-216ENST00000439475 GNPNAT1Q96EK6 184 aaPredicted RBP7.47□□□□□ -1.21
MCF2L-216ENST00000439475 Q9H3A6 140 aa7.47□□□□□ -1.21
MCF2L-216ENST00000439475 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
MCF2L-216ENST00000439475 DYNC2H1Q8NCM8 4307 aaKnown RBP7.47□□□□□ -1.21
MCF2L-216ENST00000439475 STARD9Q9P2P6 4700 aa7.46□□□□□ -1.21
MCF2L-216ENST00000439475 TRBV7-9A0A0J9YWB2 115 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 C7orf71A4D174 169 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 RBAKDNA6NC62 111 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 PGPA6NDG6 321 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 CDC34P49427 236 aaPredicted RBP7.46□□□□□ -1.22
MCF2L-216ENST00000439475 RAB2AP61019 212 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 ARL6IP6Q8N6S5 226 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 ZNF503Q96F45 646 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 PHYHIPLQ96FC7 376 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 ACTR3CQ9C0K3 210 aaPredicted RBP7.46□□□□□ -1.22
MCF2L-216ENST00000439475 OTORQ9NRC9 128 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 PLA2G2EQ9NZK7 142 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 ZNF492Q9P255 531 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 TNFSF18Q9UNG2 199 aa7.46□□□□□ -1.22
MCF2L-216ENST00000439475 SACSQ9NZJ4 4579 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 IGKV2-40A0A087WW87 121 aaPredicted RBP7.45□□□□□ -1.22
MCF2L-216ENST00000439475 IGKV2D-40P01614 121 aaPredicted RBP7.45□□□□□ -1.22
MCF2L-216ENST00000439475 PRM2P04554 102 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 P0DMU3 169 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 DEFB130BP0DP73 79 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 DEFB130AP0DP74 79 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 CRISP2P16562 243 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 ZNF138P52744 262 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 KIR3DS1Q14943 382 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 LENEPQ9Y5L5 61 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 TENM2Q9NT68 2774 aa7.45□□□□□ -1.22
MCF2L-216ENST00000439475 RNF222A6NCQ9 220 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 CBY3A6NI87 242 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 KLLNB2CW77 178 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 DIRC3C9JPN6 131 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 HMGB3O15347 200 aaKnown RBP7.44□□□□□ -1.22
MCF2L-216ENST00000439475 ARPC5O15511 151 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 ATP5G1P05496 136 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 STAG3L2P0CL84 134 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 RNASE4P34096 147 aaKnown RBP7.44□□□□□ -1.22
MCF2L-216ENST00000439475 ATP5G3P48201 142 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 RPL7L1Q6DKI1 246 aaKnown RBP7.44□□□□□ -1.22
MCF2L-216ENST00000439475 EIF4E3Q8N5X7 224 aaKnown RBP7.44□□□□□ -1.22
MCF2L-216ENST00000439475 ZNF680Q8NEM1 530 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 RNASE8Q8TDE3 154 aaKnown RBP7.44□□□□□ -1.22
MCF2L-216ENST00000439475 RAB24Q969Q5 203 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 FAM19A4Q96LR4 140 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 HYLS1Q96M11 299 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 VGLL1Q99990 258 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 NOP10Q9NPE3 64 aaKnown RBP7.44□□□□□ -1.22
MCF2L-216ENST00000439475 TMEM167BQ9NRX6 74 aa7.44□□□□□ -1.22
MCF2L-216ENST00000439475 SERTM2A0A1B0GWG4 89 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 F5H768 121 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 K7EQM0 130 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 RGS13O14921 159 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 CXorf1O96002 111 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 AKR1C8PQ5T2L2 129 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 C15orf53Q8NAA6 179 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 TMED6Q8WW62 240 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 ARPC5LQ9BPX5 153 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 LINC00467Q9BRT7 94 aa7.43□□□□□ -1.22
MCF2L-216ENST00000439475 PLAC8L1A1L4L8 177 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 ZNF324O75467 553 aaPredicted RBP7.42□□□□□ -1.22
MCF2L-216ENST00000439475 EIF3GO75821 320 aaKnown RBP eCLIP7.42□□□□□ -1.22
MCF2L-216ENST00000439475 ARL14EPLP0DKL9 152 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 CD300CQ08708 224 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 BTN1A1Q13410 526 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 UBE2DNLQ8IWF7 75 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 ST6GAL2Q96JF0 529 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 RPH3ALQ9UNE2 315 aa7.42□□□□□ -1.22
MCF2L-216ENST00000439475 PLECQ15149 4684 aaKnown RBP7.42□□□□□ -1.22
MCF2L-216ENST00000439475 CSMD3Q7Z407 3707 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 IGHV1OR15-1A0A075B7D0 117 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 A0A0D9SG52 128 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 HMSDA8MTL9 139 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 GCHFRP30047 84 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 EIF5AP63241 154 aaKnown RBP7.41□□□□□ -1.22
MCF2L-216ENST00000439475 DAZ2Q13117 558 aaKnown RBP7.41□□□□□ -1.22
MCF2L-216ENST00000439475 IBA57Q5T440 356 aaKnown RBP7.41□□□□□ -1.22
MCF2L-216ENST00000439475 IQCF2Q8IXL9 164 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 ZFAND2AQ8N6M9 145 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 POM121L12Q8N7R1 296 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 NDFIP1Q9BT67 221 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 SH3BGRL3Q9H299 93 aa7.41□□□□□ -1.22
MCF2L-216ENST00000439475 GAGE12BA1L429 117 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 FBLL1A6NHQ2 334 aaKnown RBP7.4□□□□□ -1.22
MCF2L-216ENST00000439475 GAGE7O76087 117 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 GAGE12FP0CL80 117 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 GAGE12GP0CL81 117 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 GAGE12IP0CL82 117 aa7.4□□□□□ -1.22
MCF2L-216ENST00000439475 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
MCF2L-216ENST00000439475 ZNF345Q14585 488 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms