RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 UPK1BO75841 260 aa12.88□□□□□ -0.35
AC004540.1-201ENST00000439120 ICAM4Q14773 271 aa12.88□□□□□ -0.35
AC004540.1-201ENST00000439120 C6orf223Q8N319 242 aa12.88□□□□□ -0.35
AC004540.1-201ENST00000439120 SLC25A2Q9BXI2 301 aa12.88□□□□□ -0.35
AC004540.1-201ENST00000439120 OR5AC2Q9NZP5 309 aa12.88□□□□□ -0.35
AC004540.1-201ENST00000439120 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
AC004540.1-201ENST00000439120 TRGV2A0A075B6R0 118 aa12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 C17orf112F2Z3M2 114 aa12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 GPX1P07203 203 aa12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 RNASE4P34096 147 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 TMEM78Q5T7P6 136 aa12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 FAM122CQ6P4D5 195 aa12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 RXFP4Q8TDU9 374 aa12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 ZNF503Q96F45 646 aa12.87□□□□□ -0.35
AC004540.1-201ENST00000439120 NBEAP1P0C6P0 100 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 HOXA5P20719 270 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 Q6ZTI0 123 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 MIR17HGQ75NE6 70 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 EIF4E3Q8N5X7 224 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 MRPL32Q9BYC8 188 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 OR51M1Q9H341 326 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 GSN-AS1Q9NRJ2 163 aa12.86□□□□□ -0.35
AC004540.1-201ENST00000439120 KIAA1109Q2LD37 5005 aa12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 IGKV2-40A0A087WW87 121 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 KLLNB2CW77 178 aa12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 INMT-MINDY4F8WBC2 141 aa12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 IGKV2D-40P01614 121 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 CD300CQ08708 224 aa12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 C9orf47Q6ZRZ4 202 aa12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 WDR61Q9GZS3 305 aaKnown RBP12.85□□□□□ -0.35
AC004540.1-201ENST00000439120 TRGV1A0A0A0MS02 117 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 H3BNG1 76 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 RGS13O14921 159 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 OR7C2O60412 319 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 OR10J4P0C629 311 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 FAM167A-AS1Q96KT0 104 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 Q9H8V8 135 aa12.84□□□□□ -0.35
AC004540.1-201ENST00000439120 H0YIZ8 118 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 SSNA1O43805 119 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 NMBP08949 121 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 PET100P0DJ07 73 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 CRISP2P16562 243 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 CSN1S1P47710 185 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 TNP2Q05952 138 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 ANXA2RQ3ZCQ2 193 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 TTC32Q5I0X7 151 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 ARPC5LQ9BPX5 153 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 FUT9Q9Y231 359 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 PKD1P98161 4303 aa12.83□□□□□ -0.36
AC004540.1-201ENST00000439120 C11orf72Q8NBR9 251 aa12.82□□□□□ -0.36
AC004540.1-201ENST00000439120 PPP1R1CQ8WVI7 109 aa12.82□□□□□ -0.36
AC004540.1-201ENST00000439120 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
AC004540.1-201ENST00000439120 ATP5SQ99766 215 aa12.82□□□□□ -0.36
AC004540.1-201ENST00000439120 VGLL1Q99990 258 aa12.82□□□□□ -0.36
AC004540.1-201ENST00000439120 ZNF138P52744 262 aa12.81□□□□□ -0.36
AC004540.1-201ENST00000439120 DEFA1P59665 94 aa12.81□□□□□ -0.36
AC004540.1-201ENST00000439120 DEFA3P59666 94 aa12.81□□□□□ -0.36
AC004540.1-201ENST00000439120 SCGB1C1Q8TD33 95 aa12.81□□□□□ -0.36
AC004540.1-201ENST00000439120 PHYHIPLQ96FC7 376 aa12.81□□□□□ -0.36
AC004540.1-201ENST00000439120 PTTG2Q9NZH5 202 aa12.81□□□□□ -0.36
AC004540.1-201ENST00000439120 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
AC004540.1-201ENST00000439120 IFNA5P01569 189 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 TCL1AP56279 114 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 H2BFSP57053 126 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 IFITM3Q01628 133 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 ESRGQ1W209 222 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 IBA57Q5T440 356 aaKnown RBP12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 ZFAND2AQ8N6M9 145 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 KLF12Q9Y4X4 402 aa12.8□□□□□ -0.36
AC004540.1-201ENST00000439120 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 C16orf90A8MZG2 172 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 TAS2R45P59539 299 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 RANP62826 216 aaKnown RBP12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 KHDC3LQ587J8 217 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 Q8TAT8 98 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 C18orf15Q96N68 181 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 MARVELD1Q9BSK0 173 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 UPK3BQ9BT76 320 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 MRPS16Q9Y3D3 137 aaKnown RBP12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
AC004540.1-201ENST00000439120 SPINK4O60575 86 aa12.78□□□□□ -0.36
AC004540.1-201ENST00000439120 MPC2O95563 127 aa12.78□□□□□ -0.36
AC004540.1-201ENST00000439120 PRR9Q5T870 116 aa12.78□□□□□ -0.36
AC004540.1-201ENST00000439120 LYPD1Q8N2G4 141 aa12.78□□□□□ -0.36
AC004540.1-201ENST00000439120 SMIM3Q9BZL3 60 aa12.78□□□□□ -0.36
AC004540.1-201ENST00000439120 Q9H3A6 140 aa12.78□□□□□ -0.36
AC004540.1-201ENST00000439120 TP53TG3Q9ULZ0 132 aa12.78□□□□□ -0.36
AC004540.1-201ENST00000439120 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.37
AC004540.1-201ENST00000439120 RPL12P30050 165 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms