RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ATP6V0BQ99437 205 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 MAP1LC3CQ9BXW4 147 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 MED13LQ71F56 2210 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 HELZ2Q9BYK8 2649 aaKnown RBP14.34□□□□□ -0.11
CLK1-205ENST00000434813 IGHV1-69DA0A0B4J2H0 117 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 IGHV1-69P01742 117 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 TSPOP30536 169 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 FER1L6-AS1Q8NA97 138 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 MRPS16Q9Y3D3 137 aaKnown RBP14.34□□□□□ -0.11
CLK1-205ENST00000434813 COX6B1P14854 86 aa14.33□□□□□ -0.12
CLK1-205ENST00000434813 ATP5J2P56134 94 aa14.33□□□□□ -0.12
CLK1-205ENST00000434813 COL5A1-AS1Q5SY13 56 aa14.33□□□□□ -0.12
CLK1-205ENST00000434813 FA2HQ7L5A8 372 aa14.33□□□□□ -0.12
CLK1-205ENST00000434813 TMEM219Q86XT9 240 aa14.33□□□□□ -0.12
CLK1-205ENST00000434813 TMEM191AQ9H0A3 160 aa14.33□□□□□ -0.12
CLK1-205ENST00000434813 LAMTOR2Q9Y2Q5 125 aa14.33□□□□□ -0.12
CLK1-205ENST00000434813 D6R8Y8 96 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 CLEC2AQ6UVW9 174 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 AMN1Q8IY45 258 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 PSMG3-AS1Q96PY0 264 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 METTL26Q96S19 204 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 ST20Q9HBF5 79 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 ABCA2Q9BZC7 2435 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 TRAV41A0A0B4J266 112 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 PRAC2D3DTV9 90 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 NDUFS8O00217 210 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 ORMDL3Q8N138 153 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 PRSS3P2Q8NHM4 247 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 PIFOQ8TCI5 191 aa14.32□□□□□ -0.12
CLK1-205ENST00000434813 MRPL53Q96EL3 112 aaKnown RBP14.32□□□□□ -0.12
CLK1-205ENST00000434813 FAM223BA6NKX1 122 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 ATP5G2Q06055 141 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 ZNF575Q86XF7 245 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 FAM223AQ8IWN6 122 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 RNF182Q8N6D2 247 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 U3KQE9 123 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 IGHV3OR16-10A0A075B7F0 116 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 IGHV4-61A0A0C4DH41 118 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 IGHV3-66A0A0C4DH42 116 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 FABP5P3A8MUU1 101 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 SRSF1Q07955 248 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■□□□□ 10.6
CLK1-205ENST00000434813 ERCC8Q13216 396 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 LINC01559Q495D7 138 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 OR10AG1Q8NH19 301 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 PRELID3AQ96N28 172 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 CNFNQ9BYD5 112 aa14.31□□□□□ -0.12
CLK1-205ENST00000434813 TRAV40A0A0B4J280 105 aa14.3□□□□□ -0.12
CLK1-205ENST00000434813 MRPL51Q4U2R6 128 aaKnown RBP14.3□□□□□ -0.12
CLK1-205ENST00000434813 MEGF9Q9H1U4 602 aa14.3□□□□□ -0.12
CLK1-205ENST00000434813 A1L4Q6 167 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 ZNF25P17030 456 aaPredicted RBP14.29□□□□□ -0.12
CLK1-205ENST00000434813 IFI27P40305 119 aaPredicted RBP14.29□□□□□ -0.12
CLK1-205ENST00000434813 C10orf105Q8TEF2 133 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 ZNF747Q9BV97 191 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 SIGLEC8Q9NYZ4 499 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 FASNP49327 2511 aaKnown RBP14.29□□□□□ -0.12
CLK1-205ENST00000434813 TRAV8-2A0A0B4J237 113 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 ORM1P02763 201 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 G0S2P27469 103 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 LINC01545Q5VT33 79 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 BRD3OSQ6XYD6 125 aa14.29□□□□□ -0.12
CLK1-205ENST00000434813 UTP20O75691 2785 aaKnown RBP14.28□□□□□ -0.12
CLK1-205ENST00000434813 TWIST1Q15672 202 aa14.28□□□□□ -0.12
CLK1-205ENST00000434813 C8orf86Q6ZUL3 223 aa14.28□□□□□ -0.12
CLK1-205ENST00000434813 IL17RELQ6ZVW7 336 aa14.28□□□□□ -0.12
CLK1-205ENST00000434813 LRRK2Q5S007 2527 aa14.28□□□□□ -0.12
CLK1-205ENST00000434813 IGHV3OR16-13A0A075B7E8 117 aa14.27□□□□□ -0.12
CLK1-205ENST00000434813 IGHV3-74A0A0B4J1X5 117 aa14.27□□□□□ -0.12
CLK1-205ENST00000434813 MUC21A0A0G2JKD1 596 aa14.27□□□□□ -0.12
CLK1-205ENST00000434813 MUC21A0A140T8X8 626 aa14.27□□□□□ -0.12
CLK1-205ENST00000434813 MUC21Q5SSG8 566 aa14.27□□□□□ -0.12
CLK1-205ENST00000434813 TMEM208Q9BTX3 173 aa14.27□□□□□ -0.12
CLK1-205ENST00000434813 TENM4Q6N022 2769 aa14.27□□□□□ -0.12
CLK1-205ENST00000434813 CRYBG3Q68DQ2 2970 aa14.27□□□□□ -0.13
CLK1-205ENST00000434813 A0A096LNJ9 63 aa14.27□□□□□ -0.13
CLK1-205ENST00000434813 hDV102S1A0JD36 115 aa14.27□□□□□ -0.13
CLK1-205ENST00000434813 STPG4Q8N801 248 aa14.27□□□□□ -0.13
CLK1-205ENST00000434813 HIF1ANQ9NWT6 349 aa14.27□□□□□ -0.13
CLK1-205ENST00000434813 GCN1Q92616 2671 aaKnown RBP14.27□□□□□ -0.13
CLK1-205ENST00000434813 ZNF207O43670 478 aaKnown RBP14.26□□□□□ -0.13
CLK1-205ENST00000434813 TRGV3P03979 118 aa14.26□□□□□ -0.13
CLK1-205ENST00000434813 IGF1P05019 195 aa14.26□□□□□ -0.13
CLK1-205ENST00000434813 GAGE1Q13065 139 aa14.26□□□□□ -0.13
CLK1-205ENST00000434813 AGPAT4-IT1Q9H0P7 198 aa14.26□□□□□ -0.13
CLK1-205ENST00000434813 SVEP1Q4LDE5 3571 aa14.26□□□□□ -0.13
CLK1-205ENST00000434813 IGHV3-49A0A0A0MS15 119 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 HSBP1L1C9JCN9 74 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 TFPI2P48307 235 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 FAM106AQ4KMX7 169 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 DLEU1O43261 78 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 CKS2P33552 79 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 HIST1H1AQ02539 215 aaPredicted RBP14.25□□□□□ -0.13
CLK1-205ENST00000434813 LOXL1Q08397 574 aaPredicted RBP14.25□□□□□ -0.13
CLK1-205ENST00000434813 TMEM78Q5T7P6 136 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 LINC00527Q9UJ94 153 aa14.25□□□□□ -0.13
CLK1-205ENST00000434813 LOC389332A0A1B0GUA5 103 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 BRI3O95415 125 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 IGHV4-38-2P0DP08 117 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 GLMPQ8WWB7 406 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 NRGNQ92686 78 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms