RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ZNF726P1Q15940 193 aa13.19□□□□□ -0.3
HLA-F-220ENST00000434407 SSX7Q7RTT5 188 aa13.19□□□□□ -0.3
HLA-F-220ENST00000434407 ARL6IP6Q8N6S5 226 aa13.19□□□□□ -0.3
HLA-F-220ENST00000434407 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
HLA-F-220ENST00000434407 IGKV2-40A0A087WW87 121 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-220ENST00000434407 RBAKDNA6NC62 111 aa13.18□□□□□ -0.3
HLA-F-220ENST00000434407 IGKV2D-40P01614 121 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-220ENST00000434407 HBE1P02100 147 aa13.18□□□□□ -0.3
HLA-F-220ENST00000434407 GCHFRP30047 84 aa13.18□□□□□ -0.3
HLA-F-220ENST00000434407 LEPP41159 167 aa13.18□□□□□ -0.3
HLA-F-220ENST00000434407 VGLL1Q99990 258 aa13.18□□□□□ -0.3
HLA-F-220ENST00000434407 CTXND1A0A1B0GTU2 59 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 CXorf1O96002 111 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 SLC25A5P05141 298 aaKnown RBP13.17□□□□□ -0.3
HLA-F-220ENST00000434407 CRISP2P16562 243 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 CSN1S1P47710 185 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 IFITM2Q01629 132 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 RRN3P1Q2M238 152 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 AKR1C8PQ5T2L2 129 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-220ENST00000434407 RXFP4Q8TDU9 374 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 TMEM208Q9BTX3 173 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 CELA1Q9UNI1 258 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 SACSQ9NZJ4 4579 aa13.17□□□□□ -0.3
HLA-F-220ENST00000434407 TRBV7-9A0A0J9YWB2 115 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 PGPA6NDG6 321 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 NUPR2A6NF83 97 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 KLLNB2CW77 178 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 DIRC3C9JPN6 131 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 NMBP08949 121 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 SEC11BP0C7V7 166 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 SLC51BQ86UW2 128 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 PHLDA1Q8WV24 401 aaPredicted RBP13.16□□□□□ -0.3
HLA-F-220ENST00000434407 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
HLA-F-220ENST00000434407 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
HLA-F-220ENST00000434407 ZNF705GA8MUZ8 300 aaPredicted RBP13.15□□□□□ -0.3
HLA-F-220ENST00000434407 H7BYZ3 331 aa13.15□□□□□ -0.3
HLA-F-220ENST00000434407 PRM2P04554 102 aa13.15□□□□□ -0.3
HLA-F-220ENST00000434407 TAS2R60P59551 318 aa13.15□□□□□ -0.3
HLA-F-220ENST00000434407 TMEM78Q5T7P6 136 aa13.15□□□□□ -0.3
HLA-F-220ENST00000434407 LINC01587Q99440 93 aa13.15□□□□□ -0.3
HLA-F-220ENST00000434407 ZNF471Q9BX82 626 aaPredicted RBP13.15□□□□□ -0.3
HLA-F-220ENST00000434407 C12orf74Q32Q52 190 aa13.14□□□□□ -0.31
HLA-F-220ENST00000434407 FAM74A1Q5RGS3 127 aa13.14□□□□□ -0.31
HLA-F-220ENST00000434407 ZFAND2AQ8N6M9 145 aa13.14□□□□□ -0.31
HLA-F-220ENST00000434407 STOML3Q8TAV4 291 aa13.14□□□□□ -0.31
HLA-F-220ENST00000434407 DKK2Q9UBU2 259 aa13.14□□□□□ -0.31
HLA-F-220ENST00000434407 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
HLA-F-220ENST00000434407 PLAC8L1A1L4L8 177 aa13.13□□□□□ -0.31
HLA-F-220ENST00000434407 AZU1P20160 251 aa13.13□□□□□ -0.31
HLA-F-220ENST00000434407 ZNF138P52744 262 aa13.13□□□□□ -0.31
HLA-F-220ENST00000434407 EIF5AP63241 154 aaKnown RBP13.13□□□□□ -0.31
HLA-F-220ENST00000434407 LCE2AQ5TA79 106 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-220ENST00000434407 TMED6Q8WW62 240 aa13.13□□□□□ -0.31
HLA-F-220ENST00000434407 LENEPQ9Y5L5 61 aa13.13□□□□□ -0.31
HLA-F-220ENST00000434407 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
HLA-F-220ENST00000434407 C7orf71A4D174 169 aa13.12□□□□□ -0.31
HLA-F-220ENST00000434407 C11orf94C9JXX5 98 aa13.12□□□□□ -0.31
HLA-F-220ENST00000434407 ZNF324O75467 553 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-220ENST00000434407 SPART-AS1P0CW21 52 aa13.12□□□□□ -0.31
HLA-F-220ENST00000434407 TEX261Q6UWH6 196 aa13.12□□□□□ -0.31
HLA-F-220ENST00000434407 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
HLA-F-220ENST00000434407 YTHDF2Q9Y5A9 579 aaKnown RBP13.12□□□□□ -0.31
HLA-F-220ENST00000434407 TRAV12-3A0A0B4J271 114 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 A0A1W2PRE2 83 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 J3KRW8 73 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 IFNA7P01567 189 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
HLA-F-220ENST00000434407 EMP1P54849 157 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 FAM222AQ5U5X8 452 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 ZNF493Q6ZR52 646 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 Q6ZTC4 211 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 C5orf17Q8NAS9 161 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
HLA-F-220ENST00000434407 ALMS1Q8TCU4 4167 aa13.11□□□□□ -0.31
HLA-F-220ENST00000434407 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 RGS13O14921 159 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 FHITP49789 147 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 PRR9Q5T870 116 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 ZNF767PQ75MW2 155 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 Q8TAT8 98 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 RNASE8Q8TDE3 154 aaKnown RBP13.1□□□□□ -0.31
HLA-F-220ENST00000434407 C16orf74Q96GX8 76 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 PYGO2Q9BRQ0 406 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 LINC00467Q9BRT7 94 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 NIPSNAP3BQ9BS92 247 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 TMPRSS5Q9H3S3 457 aa13.1□□□□□ -0.31
HLA-F-220ENST00000434407 SERTM2A0A1B0GWG4 89 aa13.09□□□□□ -0.31
HLA-F-220ENST00000434407 MAP1LC3B2A6NCE7 125 aa13.09□□□□□ -0.31
HLA-F-220ENST00000434407 GPX1P07203 203 aa13.09□□□□□ -0.31
HLA-F-220ENST00000434407 FGF8P55075 233 aaPredicted RBP13.09□□□□□ -0.31
HLA-F-220ENST00000434407 GNG5P63218 68 aa13.09□□□□□ -0.31
HLA-F-220ENST00000434407 BTN1A1Q13410 526 aa13.09□□□□□ -0.31
HLA-F-220ENST00000434407 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms