RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CSN1S1P47710 185 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 RANP62826 216 aaKnown RBP6.97□□□□□ -1.29
HDAC6-207ENST00000430858 TMEM78Q5T7P6 136 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 PQLC2Q6ZP29 291 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 HSD17B11Q8NBQ5 300 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 OR2G3Q8NGZ4 309 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 PHYHIPLQ96FC7 376 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 FAM19A4Q96LR4 140 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 PYGO2Q9BRQ0 406 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 PSMG3Q9BT73 122 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-207ENST00000430858 Q9H3A6 140 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 TIMM8BQ9Y5J9 83 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-207ENST00000430858 HYDINQ4G0P3 5121 aa6.97□□□□□ -1.29
HDAC6-207ENST00000430858 IGKV2-40A0A087WW87 121 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-207ENST00000430858 FXYD6-FXYD2A0A087WZ82 144 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 TRAV12-3A0A0B4J271 114 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 TRBV7-9A0A0J9YWB2 115 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 C7orf71A4D174 169 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 RBAKDNA6NC62 111 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 KLLNB2CW77 178 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 IGKV2D-40P01614 121 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-207ENST00000430858 MBP02144 154 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 DEFB130BP0DP73 79 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 DEFB130AP0DP74 79 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 HTN3P15516 51 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 CRISP2P16562 243 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 RAB2AP61019 212 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 SERF2P84101 59 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 OR10G4Q8NGN3 311 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 OR10G9Q8NGN4 311 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 OR10G7Q8NGN6 311 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 OR2T35Q8NGX2 323 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 RXFP4Q8TDU9 374 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 ZNF492Q9P255 531 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 TNFSF18Q9UNG2 199 aa6.96□□□□□ -1.3
HDAC6-207ENST00000430858 BORCS7-ASMTA0A0B4J1R7 106 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 RNF222A6NCQ9 220 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 ZNF324O75467 553 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-207ENST00000430858 P0DMU3 169 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 FAM231CP0DMU5 169 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 ATP6V0CP27449 155 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 ZNF138P52744 262 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 FAM74A1Q5RGS3 127 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 CMTM2Q8TAZ6 248 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 VGLL1Q99990 258 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 LINC00467Q9BRT7 94 aa6.95□□□□□ -1.3
HDAC6-207ENST00000430858 NOP10Q9NPE3 64 aaKnown RBP6.95□□□□□ -1.3
HDAC6-207ENST00000430858 CBY3A6NI87 242 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 SNURFLB1AK76 121 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 DIRC3C9JPN6 131 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
HDAC6-207ENST00000430858 ATP5G1P05496 136 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 GPX1P07203 203 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 ATP5G3P48201 142 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 CDC34P49427 236 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-207ENST00000430858 CD300CQ08708 224 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 BTN1A1Q13410 526 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 ZFAND2AQ8N6M9 145 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 ARL6IP6Q8N6S5 226 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 ZNF680Q8NEM1 530 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 GNPNAT1Q96EK6 184 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-207ENST00000430858 OTORQ9NRC9 128 aa6.94□□□□□ -1.3
HDAC6-207ENST00000430858 PGPA6NDG6 321 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 F5H768 121 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 G3V3Q6 166 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 TAAR5O14804 337 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 HMGB3O15347 200 aaKnown RBP6.93□□□□□ -1.3
HDAC6-207ENST00000430858 STAG3L2P0CL84 134 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 STAG3L3P0CL85 134 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 ARL14EPLP0DKL9 152 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 RNASE4P34096 147 aaKnown RBP6.93□□□□□ -1.3
HDAC6-207ENST00000430858 DAZ2Q13117 558 aaKnown RBP6.93□□□□□ -1.3
HDAC6-207ENST00000430858 ANXA2RQ3ZCQ2 193 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 RPL7L1Q6DKI1 246 aaKnown RBP6.93□□□□□ -1.3
HDAC6-207ENST00000430858 TMEM88Q6PEY1 159 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 EIF4E3Q8N5X7 224 aaKnown RBP6.93□□□□□ -1.3
HDAC6-207ENST00000430858 LINC00612Q8N6U2 182 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 POM121L12Q8N7R1 296 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 C15orf53Q8NAA6 179 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 TMED6Q8WW62 240 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 RAB24Q969Q5 203 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 HYLS1Q96M11 299 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 SH3BGRL3Q9H299 93 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 LENEPQ9Y5L5 61 aa6.93□□□□□ -1.3
HDAC6-207ENST00000430858 RGS13O14921 159 aa6.92□□□□□ -1.3
HDAC6-207ENST00000430858 ARPC5O15511 151 aa6.92□□□□□ -1.3
HDAC6-207ENST00000430858 IBA57Q5T440 356 aaKnown RBP6.92□□□□□ -1.3
HDAC6-207ENST00000430858 Q8TAT8 98 aa6.92□□□□□ -1.3
HDAC6-207ENST00000430858 ACTR3CQ9C0K3 210 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-207ENST00000430858 IGHV1OR15-1A0A075B7D0 117 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 SERTM2A0A1B0GWG4 89 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 CXorf1O96002 111 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 GCHFRP30047 84 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 PRR9Q5T870 116 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 C11orf72Q8NBR9 251 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 SUN5Q8TC36 379 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 ST6GAL2Q96JF0 529 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 GSN-AS1Q9NRJ2 163 aa6.91□□□□□ -1.3
HDAC6-207ENST00000430858 TMEM167BQ9NRX6 74 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms