RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TEPPQ6URK8 271 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 DPPA3Q6W0C5 159 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 Q6ZQT7 251 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 ACOT7LQ6ZUV0 252 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 S100A7AQ86SG5 101 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 OR4D10Q8NGI6 311 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 TP53RKQ96S44 253 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 TRGV9Q99603 122 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 C1orf43Q9BWL3 253 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 NDUFA13Q9P0J0 144 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 TP53TG3Q9ULZ0 132 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 HIGD1AQ9Y241 93 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 A0A087WYN8 130 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 PRAC2D3DTV9 90 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 H3BTX0 84 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 L7N2F9 121 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 PI3P19957 117 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 RCVRNP35243 200 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 GPX4P36969 197 aaPredicted RBP3.99□□□□□ -1.77
SDCBP-203ENST00000424270 PIGPP57054 158 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 RAB11AP62491 216 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 AKR1C1Q04828 323 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 RAB31Q13636 194 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 NMSQ5H8A3 153 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 CST9LP1Q5W188 147 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 LCN15Q6UWW0 184 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 OR10G4Q8NGN3 311 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 OR1S1Q8NH92 325 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 LYPD6BQ8NI32 183 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 TMEM170AQ8WVE7 144 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 SLC50A1Q9BRV3 221 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 TMEM222Q9H0R3 208 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 GTSF1LQ9H1H1 148 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 SCN3BQ9NY72 215 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 COPZ2Q9P299 210 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 KLK12Q9UKR0 248 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 U3KQ87 197 aa3.99□□□□□ -1.77
SDCBP-203ENST00000424270 IGHV1OR15-1A0A075B7D0 117 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 A0A087WX48 190 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 TRAV4A0A0B4J268 109 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 A0A0G2JRQ6 117 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 SMCO3A2RU48 225 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 PGPA6NDG6 321 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 GAGE10A6NGK3 116 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 PMS2P5A8MQ11 134 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 NOTOA8MTQ0 251 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 USP17L23D6RBM5 183 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 H3BRN7 92 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 HYPMO75409 117 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 CRPP02741 224 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 IL5P05113 134 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 AQP4P55087 323 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-203ENST00000424270 POLR2GP62487 172 aaKnown RBP eCLIP3.98□□□□□ -1.77
SDCBP-203ENST00000424270 MEF2DQ14814 521 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 ELOBQ15370 118 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 C22orf42Q6IC83 251 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 DGAT2L7PQ6IED9 249 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 DHRSXQ8N5I4 330 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 C9orf163Q8N9P6 203 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 OR52I2Q8NH67 350 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 SUN5Q8TC36 379 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 DTD1Q8TEA8 209 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 SAT2Q96F10 170 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-203ENST00000424270 RNF185Q96GF1 192 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 DNAJC30Q96LL9 226 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 LINC00477Q96M19 166 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 ODF3Q96PU9 254 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 SHANK2-AS3Q9BTD1 123 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
SDCBP-203ENST00000424270 LSM2Q9Y333 95 aaKnown RBP3.98□□□□□ -1.77
SDCBP-203ENST00000424270 A0A087X0K7 114 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 C5orf51A6NDU8 294 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 FBLL1A6NHQ2 334 aaKnown RBP3.97□□□□□ -1.77
SDCBP-203ENST00000424270 CTDSP2O14595 271 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 OR4E1P0C645 316 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 CXCL2P19875 107 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 RPL19P84098 196 aaKnown RBP3.97□□□□□ -1.77
SDCBP-203ENST00000424270 MLLT11Q13015 90 aaPredicted RBP3.97□□□□□ -1.77
SDCBP-203ENST00000424270 OPCMLQ14982 345 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 RHOHQ15669 191 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 MUC21Q5SSG8 566 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 ZNF664Q8N3J9 261 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 CCDC71LQ8N9Z2 235 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 LHFPL5Q8TAF8 219 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 RAB24Q969Q5 203 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 ZNF331Q9NQX6 463 aaPredicted RBP3.97□□□□□ -1.77
SDCBP-203ENST00000424270 PLCXD1Q9NUJ7 323 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 CACFD1Q9UGQ2 172 aa3.97□□□□□ -1.77
SDCBP-203ENST00000424270 IGHV3-64A0A075B6Q5 118 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 A0A0A6YYH2 397 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 IGHV3-73A0A0B4J1V6 119 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 SMIM31A0A1B0GVY4 71 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 A6NJ64 397 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 PRSS1P07477 247 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 SMIM18P0DKX4 95 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 SULT1A3P0DMM9 295 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 SULT1A4P0DMN0 295 aa3.96□□□□□ -1.78
SDCBP-203ENST00000424270 CAMLGP49069 296 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms