RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ATP6V0BQ99437 205 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 SH2D7A6NKC9 451 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-202ENST00000424011 LINC01548A6NM66 108 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 TCRAP04437 139 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 APCP25054 2843 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 OR1N2Q8NGR9 330 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 TMEM70Q9BUB7 260 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 RABAC1Q9UI14 185 aa12.87□□□□□ -0.35
CMTM3-202ENST00000424011 IGF1P05019 195 aa12.86□□□□□ -0.35
CMTM3-202ENST00000424011 MRPL54Q6P161 138 aaKnown RBP12.86□□□□□ -0.35
CMTM3-202ENST00000424011 GTF2H5Q6ZYL4 71 aa12.86□□□□□ -0.35
CMTM3-202ENST00000424011 BCL6BQ8N143 479 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-202ENST00000424011 NAV2Q8IVL1 2488 aa12.86□□□□□ -0.35
CMTM3-202ENST00000424011 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 GPR183P32249 361 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 PDE6HQ13956 83 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 Q5PR19 223 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 EXOC3-AS1Q8N2X6 119 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 GPR82Q96P67 336 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 AVPP01185 164 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 CLEC3BP05452 202 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
CMTM3-202ENST00000424011 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 SLAQ13239 276 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 LY6EQ16553 131 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 C19orf54Q5BKX5 351 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 C17orf77Q96MU5 243 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 CHRDL1Q9BU40 450 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 MLST8Q9BVC4 326 aa12.85□□□□□ -0.35
CMTM3-202ENST00000424011 IZUMO1RA6ND01 250 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 CRXO43186 299 aaPredicted RBP12.84□□□□□ -0.35
CMTM3-202ENST00000424011 TGFAP01135 160 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 RAB9AP51151 201 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 HIST1H1AQ02539 215 aaPredicted RBP12.84□□□□□ -0.35
CMTM3-202ENST00000424011 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 WFDC12Q8WWY7 111 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 GRAMD2BQ96HH9 432 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 C7orf71A4D174 169 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 MRPS12O15235 138 aaKnown RBP12.84□□□□□ -0.35
CMTM3-202ENST00000424011 IGHG2P01859 326 aa12.84□□□□□ -0.35
CMTM3-202ENST00000424011 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
CMTM3-202ENST00000424011 A0A1B0GV72 72 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 H3BUA1 57 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 BRI3O95415 125 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 LTAP01374 205 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
CMTM3-202ENST00000424011 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 SCRT2Q9NQ03 307 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 TRAV8-1A0A0A6YYK1 113 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 FAM231BA6NCW3 169 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 K7EQM0 130 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 PSG3Q16557 428 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 ZNF414Q96IQ9 312 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 AAMDCQ9H7C9 122 aa12.83□□□□□ -0.36
CMTM3-202ENST00000424011 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
CMTM3-202ENST00000424011 hDV102S1A0JD36 115 aa12.82□□□□□ -0.36
CMTM3-202ENST00000424011 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
CMTM3-202ENST00000424011 RNASEKQ6P5S7 137 aaKnown RBP12.82□□□□□ -0.36
CMTM3-202ENST00000424011 SIGLEC15Q6ZMC9 328 aa12.82□□□□□ -0.36
CMTM3-202ENST00000424011 CCDC140Q96MF4 163 aa12.82□□□□□ -0.36
CMTM3-202ENST00000424011 SOX21Q9Y651 276 aaPredicted RBP12.82□□□□□ -0.36
CMTM3-202ENST00000424011 RASL11AQ6T310 242 aa12.82□□□□□ -0.36
CMTM3-202ENST00000424011 CLEC19AQ6UXS0 136 aa12.82□□□□□ -0.36
CMTM3-202ENST00000424011 NUP35Q8NFH5 326 aa12.82□□□□□ -0.36
CMTM3-202ENST00000424011 WIPF2Q8TF74 440 aaPredicted RBP12.82□□□□□ -0.36
CMTM3-202ENST00000424011 GOLT1AQ6ZVE7 132 aa12.81□□□□□ -0.36
CMTM3-202ENST00000424011 CLEC5AQ9NY25 188 aa12.81□□□□□ -0.36
CMTM3-202ENST00000424011 A0A087X0K7 114 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 IGLV2-11P01706 119 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 TRGV3P03979 118 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 SMIM17P0DL12 118 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 PRB4P10163 310 aaPredicted RBP12.8□□□□□ -0.36
CMTM3-202ENST00000424011 SEC11AP67812 179 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 Q71RC1 249 aaPredicted RBP12.8□□□□□ -0.36
CMTM3-202ENST00000424011 KRTAP1-3Q8IUG1 177 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 GCN1Q92616 2671 aaKnown RBP12.8□□□□□ -0.36
CMTM3-202ENST00000424011 Q86TA4 180 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 USMG5Q96IX5 58 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
CMTM3-202ENST00000424011 SERTM2A0A1B0GWG4 89 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 C19orf71A6NCJ1 209 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 SYS1-DBNDD2H3BUS1 97 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 K7EP34 96 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 IGHV4-31P0DP07 118 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 MAPK1IP1LQ8NDC0 245 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 PRSS22Q9GZN4 317 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 HIGD1CA8MV81 97 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 CSN1S1P47710 185 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 PRNTQ86SH4 94 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 CIARTQ8N365 385 aaPredicted RBP12.79□□□□□ -0.36
CMTM3-202ENST00000424011 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 Q96MF0 132 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 TMEM191AQ9H0A3 160 aa12.79□□□□□ -0.36
CMTM3-202ENST00000424011 C9orf118A6NHY6 69 aa12.78□□□□□ -0.36
CMTM3-202ENST00000424011 PPIFP30405 207 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms