RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 H2AFB1P0C5Y9 115 aa10.04□□□□□ -0.8
GTF3C2-204ENST00000423998 ZNF705DP0CH99 300 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-204ENST00000423998 ZNF705BP0CI00 300 aaPredicted RBP10.04□□□□□ -0.8
GTF3C2-204ENST00000423998 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
GTF3C2-204ENST00000423998 LINC01587Q99440 93 aa10.04□□□□□ -0.8
GTF3C2-204ENST00000423998 MAP1LC3BQ9GZQ8 125 aa10.04□□□□□ -0.8
GTF3C2-204ENST00000423998 IGHV3OR16-12A0A075B7B8 117 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 A0A0J9YWU9 116 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 DIRC3C9JPN6 131 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 IFNA7P01567 189 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 FXYD7P58549 80 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 TAS2R60P59551 318 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 DEFB1P60022 68 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 SUMO1P63165 101 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 FAM213BQ8TBF2 198 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
GTF3C2-204ENST00000423998 COL7A1Q02388 2944 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 PRAC2D3DTV9 90 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 M0R2Z0 102 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 FHITP49789 147 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 ZNF492Q9P255 531 aa10.02□□□□□ -0.81
GTF3C2-204ENST00000423998 CXorf65A6NEN9 183 aa10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 CT45A10P0DMU9 189 aa10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 CRISP2P16562 243 aa10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 TAGLN2P37802 199 aaKnown RBP10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 SAPCD1Q5SSQ6 148 aa10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 EPDR1Q9UM22 224 aa10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 AGRNO00468 2067 aa10.01□□□□□ -0.81
GTF3C2-204ENST00000423998 IGHV4-28A0A0C4DH34 117 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 C11orf94C9JXX5 98 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 IFNA1P01562 189 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 S100A9P06702 114 aaKnown RBP10□□□□□ -0.81
GTF3C2-204ENST00000423998 SULT1A2P50226 295 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 CYB561D1Q8N8Q1 229 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 Q8NAQ8 132 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 C16orf74Q96GX8 76 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 ATG101Q9BSB4 218 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 KLK5Q9Y337 293 aaPredicted RBP10□□□□□ -0.81
GTF3C2-204ENST00000423998 X6R8D5 127 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 STAB2Q8WWQ8 2551 aa10□□□□□ -0.81
GTF3C2-204ENST00000423998 IGKV2-40A0A087WW87 121 aaPredicted RBP9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 LOC102723971A0A1B0GUV8 181 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 C7orf71A4D174 169 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 NUPR2A6NF83 97 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 CRXO43186 299 aaPredicted RBP9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 IGKV2D-40P01614 121 aaPredicted RBP9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 TCRAP04437 139 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 BLOC1S1P78537 153 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 ZNF726P1Q15940 193 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 CST9LP1Q5W188 147 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 GOLT1AQ6ZVE7 132 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 C1orf158Q8N1D5 194 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 C9orf62Q8N4C0 152 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 MANBALQ9NQG1 85 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 RPH3ALQ9UNE2 315 aa9.99□□□□□ -0.81
GTF3C2-204ENST00000423998 TRAV12-2A0A075B6T6 113 aa9.98□□□□□ -0.81
GTF3C2-204ENST00000423998 KLLNB2CW77 178 aa9.98□□□□□ -0.81
GTF3C2-204ENST00000423998 FGF8P55075 233 aaPredicted RBP9.98□□□□□ -0.81
GTF3C2-204ENST00000423998 ERCC8Q13216 396 aa9.98□□□□□ -0.81
GTF3C2-204ENST00000423998 ZNF680Q8NEM1 530 aa9.98□□□□□ -0.81
GTF3C2-204ENST00000423998 VGLL1Q99990 258 aa9.98□□□□□ -0.81
GTF3C2-204ENST00000423998 TRAV12-3A0A0B4J271 114 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 A0A1B0GVG6 124 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 FAM74A7A6NL05 159 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 HTN1P15515 57 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 RNASE4P34096 147 aaKnown RBP9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 GFI1BQ5VTD9 330 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 TMEM75Q8N9X5 138 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 TMEM263Q8WUH6 116 aaKnown RBP9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 FAM19A4Q96LR4 140 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 TREM1Q9NP99 234 aa9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 TIMM8BQ9Y5J9 83 aaPredicted RBP9.97□□□□□ -0.81
GTF3C2-204ENST00000423998 DNAH9Q9NYC9 4486 aa9.96□□□□□ -0.81
GTF3C2-204ENST00000423998 SNURFLB1AK76 121 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 RGS13O14921 159 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 TCTAP57738 103 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 UBE2G2P60604 165 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 UBE2G1P62253 170 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 FLI1Q01543 452 aaPredicted RBP9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 PMS2P11Q13670 270 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 FAM159AQ6UWV7 190 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 KCNS1Q96KK3 526 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 ZFP30Q9Y2G7 519 aa9.96□□□□□ -0.82
GTF3C2-204ENST00000423998 TRAV21A0A0B4J279 112 aa9.95□□□□□ -0.82
GTF3C2-204ENST00000423998 J3KRW8 73 aa9.95□□□□□ -0.82
GTF3C2-204ENST00000423998 RBMY1A1P0DJD3 496 aaKnown RBP9.95□□□□□ -0.82
GTF3C2-204ENST00000423998 RBMY1CP0DJD4 496 aa9.95□□□□□ -0.82
GTF3C2-204ENST00000423998 RBMY1FQ15415 496 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms