RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RNASE8Q8TDE3 154 aaKnown RBP6.52□□□□□ -1.37
NUP50-206ENST00000422489 PPP1R1CQ8WVI7 109 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 MARVELD1Q9BSK0 173 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 PAXXQ9BUH6 204 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 SLC25A2Q9BXI2 301 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 SMIM3Q9BZL3 60 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 WDR61Q9GZS3 305 aaKnown RBP6.52□□□□□ -1.37
NUP50-206ENST00000422489 IGKV2-40A0A087WW87 121 aaPredicted RBP6.51□□□□□ -1.37
NUP50-206ENST00000422489 A0A0J9YY99 117 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 C7orf71A4D174 169 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 IFNA5P01569 189 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 IGKV2D-40P01614 121 aaPredicted RBP6.51□□□□□ -1.37
NUP50-206ENST00000422489 SLC25A5P05141 298 aaKnown RBP6.51□□□□□ -1.37
NUP50-206ENST00000422489 GPX1P07203 203 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 H2BFSP57053 126 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 CD300CQ08708 224 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 BTN1A1Q13410 526 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 FFAR4Q5NUL3 377 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 TMEM78Q5T7P6 136 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 RNF141Q8WVD5 230 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 GNPNAT1Q96EK6 184 aaPredicted RBP6.51□□□□□ -1.37
NUP50-206ENST00000422489 MRPL53Q96EL3 112 aaKnown RBP6.51□□□□□ -1.37
NUP50-206ENST00000422489 FAM167A-AS1Q96KT0 104 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 ODF3Q96PU9 254 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 VGLL1Q99990 258 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 PYGO2Q9BRQ0 406 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 KCNIP2Q9NS61 270 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 FUT9Q9Y231 359 aa6.51□□□□□ -1.37
NUP50-206ENST00000422489 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 TRAV26-1A0A087WT03 109 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 RGS13O14921 159 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 OR7C2O60412 319 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 MPC2O95563 127 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 RPL12P30050 165 aaKnown RBP6.5□□□□□ -1.37
NUP50-206ENST00000422489 FAM3BP58499 235 aaPredicted RBP6.5□□□□□ -1.37
NUP50-206ENST00000422489 RANP62826 216 aaKnown RBP6.5□□□□□ -1.37
NUP50-206ENST00000422489 PDE6HQ13956 83 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 Q6ZR54 194 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 ATP5SQ99766 215 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 MRPL32Q9BYC8 188 aaKnown RBP6.5□□□□□ -1.37
NUP50-206ENST00000422489 GSN-AS1Q9NRJ2 163 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 LINC00588Q9Y4M8 146 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
NUP50-206ENST00000422489 VPS13DQ5THJ4 4388 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 TRGV1A0A0A0MS02 117 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 A0A1B0GVY2 172 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 ZNF324O75467 553 aaPredicted RBP6.49□□□□□ -1.37
NUP50-206ENST00000422489 EIF3GO75821 320 aaKnown RBP eCLIP6.49□□□□□ -1.37
NUP50-206ENST00000422489 PET100P0DJ07 73 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 M6PRP20645 277 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 HOXA5P20719 270 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 CSN1S1P47710 185 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 ZNF138P52744 262 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 C9orf47Q6ZRZ4 202 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 Q6ZTI0 123 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 SSX7Q7RTT5 188 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 EIF4E3Q8N5X7 224 aaKnown RBP6.49□□□□□ -1.37
NUP50-206ENST00000422489 FXYD5Q96DB9 178 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 HSPB11Q9Y547 144 aa6.49□□□□□ -1.37
NUP50-206ENST00000422489 NBDYA0A0U1RRE5 68 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 KLLNB2CW77 178 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 UBE2L3P68036 154 aaKnown RBP6.48□□□□□ -1.37
NUP50-206ENST00000422489 DAZ2Q13117 558 aaKnown RBP6.48□□□□□ -1.37
NUP50-206ENST00000422489 Q6ZQT7 251 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 ZNF680Q8NEM1 530 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 ZNRF2Q8NHG8 242 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 RXFP4Q8TDU9 374 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 PHYHIPLQ96FC7 376 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 FAM19A4Q96LR4 140 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 HYLS1Q96M11 299 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 ZNF492Q9P255 531 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 TP53TG3Q9ULZ0 132 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 KLF12Q9Y4X4 402 aa6.48□□□□□ -1.37
NUP50-206ENST00000422489 IGHV1OR15-1A0A075B7D0 117 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 A0A1W2PPV4 95 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 IGHV3-53P01767 116 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 CRISP2P16562 243 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 TAS2R45P59539 299 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 ESRGQ1W209 222 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 PRR9Q5T870 116 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 ZFAND2AQ8N6M9 145 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 Q8TAT8 98 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 ARPC5LQ9BPX5 153 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 Q9H3A6 140 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 Q9H8V8 135 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 WFDC1Q9HC57 220 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 BATF3Q9NR55 127 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 MBD2Q9UBB5 411 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 RPH3ALQ9UNE2 315 aa6.47□□□□□ -1.37
NUP50-206ENST00000422489 PGPA6NDG6 321 aa6.46□□□□□ -1.38
NUP50-206ENST00000422489 SPINK4O60575 86 aa6.46□□□□□ -1.38
NUP50-206ENST00000422489 NMBP08949 121 aa6.46□□□□□ -1.38
NUP50-206ENST00000422489 ACOT6Q3I5F7 207 aaPredicted RBP6.46□□□□□ -1.38
NUP50-206ENST00000422489 ANXA2RQ3ZCQ2 193 aa6.46□□□□□ -1.38
NUP50-206ENST00000422489 KHDC3LQ587J8 217 aa6.46□□□□□ -1.38
NUP50-206ENST00000422489 MUC21Q5SSG8 566 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms