RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PLAC8L1A1L4L8 177 aa18.8■□□□□ 0.6
CDK9-202ENST00000421939 HTN1P15515 57 aa18.8■□□□□ 0.6
CDK9-202ENST00000421939 LGALS9CQ6DKI2 356 aa18.8■□□□□ 0.6
CDK9-202ENST00000421939 C16orf74Q96GX8 76 aa18.8■□□□□ 0.6
CDK9-202ENST00000421939 PLA2G2EQ9NZK7 142 aa18.8■□□□□ 0.6
CDK9-202ENST00000421939 APLNQ9ULZ1 77 aa18.8■□□□□ 0.6
CDK9-202ENST00000421939 LYRM9A8MSI8 78 aa18.79■□□□□ 0.6
CDK9-202ENST00000421939 CSN1S1P47710 185 aa18.79■□□□□ 0.6
CDK9-202ENST00000421939 TMEM78Q5T7P6 136 aa18.79■□□□□ 0.6
CDK9-202ENST00000421939 FAM19A4Q96LR4 140 aa18.79■□□□□ 0.6
CDK9-202ENST00000421939 VGLL1Q99990 258 aa18.79■□□□□ 0.6
CDK9-202ENST00000421939 SH3BGRL3Q9H299 93 aa18.79■□□□□ 0.6
CDK9-202ENST00000421939 BORCS7-ASMTA0A0B4J1R7 106 aa18.78■□□□□ 0.6
CDK9-202ENST00000421939 TRAV12-3A0A0B4J271 114 aa18.78■□□□□ 0.6
CDK9-202ENST00000421939 SLC25A5P05141 298 aaKnown RBP18.78■□□□□ 0.6
CDK9-202ENST00000421939 CDC34P49427 236 aaPredicted RBP18.78■□□□□ 0.6
CDK9-202ENST00000421939 DAD1P61803 113 aa18.78■□□□□ 0.6
CDK9-202ENST00000421939 SERF2P84101 59 aa18.78■□□□□ 0.6
CDK9-202ENST00000421939 RPL7L1Q6DKI1 246 aaKnown RBP18.78■□□□□ 0.6
CDK9-202ENST00000421939 TMEM263Q8WUH6 116 aaKnown RBP18.78■□□□□ 0.6
CDK9-202ENST00000421939 KLLNB2CW77 178 aa18.77■□□□□ 0.6
CDK9-202ENST00000421939 HMGB3O15347 200 aaKnown RBP18.77■□□□□ 0.6
CDK9-202ENST00000421939 MBP02144 154 aa18.77■□□□□ 0.6
CDK9-202ENST00000421939 ZNF493Q6ZR52 646 aa18.77■□□□□ 0.6
CDK9-202ENST00000421939 RNASE8Q8TDE3 154 aaKnown RBP18.77■□□□□ 0.6
CDK9-202ENST00000421939 VPS13DQ5THJ4 4388 aa18.77■□□□□ 0.59
CDK9-202ENST00000421939 C7orf71A4D174 169 aa18.76■□□□□ 0.59
CDK9-202ENST00000421939 ARPC5O15511 151 aa18.76■□□□□ 0.59
CDK9-202ENST00000421939 CRISP2P16562 243 aa18.76■□□□□ 0.59
CDK9-202ENST00000421939 GNPNAT1Q96EK6 184 aaPredicted RBP18.76■□□□□ 0.59
CDK9-202ENST00000421939 ARL14EPLP0DKL9 152 aa18.75■□□□□ 0.59
CDK9-202ENST00000421939 CCDC28AQ8IWP9 274 aa18.75■□□□□ 0.59
CDK9-202ENST00000421939 OTORQ9NRC9 128 aa18.75■□□□□ 0.59
CDK9-202ENST00000421939 ZNF492Q9P255 531 aa18.75■□□□□ 0.59
CDK9-202ENST00000421939 SMLR1H3BR10 107 aa18.74■□□□□ 0.59
CDK9-202ENST00000421939 NMBP08949 121 aa18.74■□□□□ 0.59
CDK9-202ENST00000421939 HTN3P15516 51 aa18.74■□□□□ 0.59
CDK9-202ENST00000421939 BTN1A1Q13410 526 aa18.74■□□□□ 0.59
CDK9-202ENST00000421939 PYGO2Q9BRQ0 406 aa18.74■□□□□ 0.59
CDK9-202ENST00000421939 TIMM8BQ9Y5J9 83 aaPredicted RBP18.74■□□□□ 0.59
CDK9-202ENST00000421939 RBAKDNA6NC62 111 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 STAG3L2P0CL84 134 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 STAG3L3P0CL85 134 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 ZNF138P52744 262 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 CD300CQ08708 224 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 ZFAND2AQ8N6M9 145 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 Q8TAT8 98 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 RXFP4Q8TDU9 374 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 RAB24Q969Q5 203 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 NDUFAF3Q9BU61 184 aa18.73■□□□□ 0.59
CDK9-202ENST00000421939 DIRC3C9JPN6 131 aa18.72■□□□□ 0.59
CDK9-202ENST00000421939 DEFB130BP0DP73 79 aa18.72■□□□□ 0.59
CDK9-202ENST00000421939 DEFB130AP0DP74 79 aa18.72■□□□□ 0.59
CDK9-202ENST00000421939 FAM74A1Q5RGS3 127 aa18.72■□□□□ 0.59
CDK9-202ENST00000421939 HYLS1Q96M11 299 aa18.72■□□□□ 0.59
CDK9-202ENST00000421939 TRBV7-9A0A0J9YWB2 115 aa18.71■□□□□ 0.59
CDK9-202ENST00000421939 TAAR5O14804 337 aa18.71■□□□□ 0.59
CDK9-202ENST00000421939 GPX1P07203 203 aa18.71■□□□□ 0.59
CDK9-202ENST00000421939 RNASE4P34096 147 aaKnown RBP18.71■□□□□ 0.59
CDK9-202ENST00000421939 CMTM2Q8TAZ6 248 aa18.71■□□□□ 0.59
CDK9-202ENST00000421939 FAM210BQ96KR6 192 aa18.71■□□□□ 0.59
CDK9-202ENST00000421939 KMT2AQ03164 3969 aa18.7■□□□□ 0.58
CDK9-202ENST00000421939 PGPA6NDG6 321 aa18.7■□□□□ 0.58
CDK9-202ENST00000421939 PRR9Q5T870 116 aa18.7■□□□□ 0.58
CDK9-202ENST00000421939 ACTR3CQ9C0K3 210 aaPredicted RBP18.7■□□□□ 0.58
CDK9-202ENST00000421939 NOP10Q9NPE3 64 aaKnown RBP18.7■□□□□ 0.58
CDK9-202ENST00000421939 ZNF324O75467 553 aaPredicted RBP18.69■□□□□ 0.58
CDK9-202ENST00000421939 GCHFRP30047 84 aa18.69■□□□□ 0.58
CDK9-202ENST00000421939 ARL6IP6Q8N6S5 226 aa18.68■□□□□ 0.58
CDK9-202ENST00000421939 RPH3ALQ9UNE2 315 aa18.68■□□□□ 0.58
CDK9-202ENST00000421939 SNURFLB1AK76 121 aa18.67■□□□□ 0.58
CDK9-202ENST00000421939 CXorf1O96002 111 aa18.67■□□□□ 0.58
CDK9-202ENST00000421939 SUN5Q8TC36 379 aa18.67■□□□□ 0.58
CDK9-202ENST00000421939 LINC00467Q9BRT7 94 aa18.67■□□□□ 0.58
CDK9-202ENST00000421939 CYTL1Q9NRR1 136 aa18.67■□□□□ 0.58
CDK9-202ENST00000421939 ZNF345Q14585 488 aa18.66■□□□□ 0.58
CDK9-202ENST00000421939 GOLT1AQ6ZVE7 132 aa18.66■□□□□ 0.58
CDK9-202ENST00000421939 SSX7Q7RTT5 188 aa18.66■□□□□ 0.58
CDK9-202ENST00000421939 ZNF680Q8NEM1 530 aa18.66■□□□□ 0.58
CDK9-202ENST00000421939 TMED6Q8WW62 240 aa18.66■□□□□ 0.58
CDK9-202ENST00000421939 LENEPQ9Y5L5 61 aa18.66■□□□□ 0.58
CDK9-202ENST00000421939 TMEM88Q6PEY1 159 aa18.65■□□□□ 0.58
CDK9-202ENST00000421939 KCNRGQ8N5I3 272 aa18.65■□□□□ 0.58
CDK9-202ENST00000421939 EIF4E3Q8N5X7 224 aaKnown RBP18.65■□□□□ 0.58
CDK9-202ENST00000421939 TMEM167BQ9NRX6 74 aa18.65■□□□□ 0.58
CDK9-202ENST00000421939 CBY3A6NI87 242 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 ATP5G1P05496 136 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 ATP5G3P48201 142 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 ANXA2RQ3ZCQ2 193 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 AKR1C8PQ5T2L2 129 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 LINC00612Q8N6U2 182 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 OR11H4Q8NGC9 324 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 ST6GAL2Q96JF0 529 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 ARPC5LQ9BPX5 153 aa18.64■□□□□ 0.57
CDK9-202ENST00000421939 CTXND1A0A1B0GTU2 59 aa18.63■□□□□ 0.57
CDK9-202ENST00000421939 RGS13O14921 159 aa18.63■□□□□ 0.57
CDK9-202ENST00000421939 GNG5P63218 68 aa18.63■□□□□ 0.57
CDK9-202ENST00000421939 ZNF726P1Q15940 193 aa18.63■□□□□ 0.57
CDK9-202ENST00000421939 IQCF2Q8IXL9 164 aa18.63■□□□□ 0.57
CDK9-202ENST00000421939 HMSDA8MTL9 139 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms