RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 DNAJC30Q96LL9 226 aa13.38□□□□□ -0.27
SYNGAP1-202ENST00000418600 A0A1B0GV90 55 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 A8MWV9 139 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 C15orf53Q8NAA6 179 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 MBD6Q96DN6 1003 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 HILS1P60008 231 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 GATD1Q8NB37 220 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 C1orf159Q96HA4 380 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 QRFPP83859 136 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 PDE6HQ13956 83 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 C11orf53Q8IXP5 236 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 ATP5G1P05496 136 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 RPL32P62910 135 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 IGKV1OR2-108A0A075B7D4 117 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 A6NDX4 124 aa13.37□□□□□ -0.27
SYNGAP1-202ENST00000418600 PCNX2A6NKB5 2137 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 SERF1AO75920 110 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 ABCA4P78363 2273 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 SPRY2O43597 315 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 TCRAP04437 139 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 MLANAQ16655 118 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 Q9HAA7 133 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 H3BUT2 72 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 LEPROTO15243 131 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 C16orf74Q96GX8 76 aa13.36□□□□□ -0.27
SYNGAP1-202ENST00000418600 DEFB135Q30KP9 77 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 TRAV25A0A0B4J276 109 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 Q5BKY6 102 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 ANAPC10Q9UM13 185 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 MYMXA0A1B0GTQ4 84 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 VWC2LB2RUY7 222 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 ADMP35318 185 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 CD300EQ496F6 205 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 LMO4P61968 165 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 HSD52Q0P140 79 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 ORAOV1Q8WV07 137 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 KLF12Q9Y4X4 402 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 HEATR1Q9H583 2144 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 ZNF134P52741 427 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 SPXQ9BT56 116 aa13.35□□□□□ -0.27
SYNGAP1-202ENST00000418600 RTTNQ86VV8 2226 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 A0A1B0GW64 132 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 FNDC10F2Z333 226 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 KIF26BQ2KJY2 2108 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 INS-IGF2F8WCM5 200 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 AJUBAQ96IF1 538 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 SMR3AQ99954 134 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
SYNGAP1-202ENST00000418600 IGHV7-81A0A0B4J1V7 117 aa13.33□□□□□ -0.27
SYNGAP1-202ENST00000418600 PFN1P07737 140 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 Q8N7P7 452 aa13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 LSM4Q9Y4Z0 139 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 RNF222A6NCQ9 220 aa13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 CRLF1O75462 422 aa13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 C14orf178Q8N769 122 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 LAMTOR2Q9Y2Q5 125 aa13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 THAP8Q8NA92 274 aa13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 IFITM2Q01629 132 aa13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 C11orf45Q8TAV5 145 aa13.33□□□□□ -0.28
SYNGAP1-202ENST00000418600 TRPT1Q86TN4 253 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 LINC00518Q8N0U6 118 aa13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 C8orf49Q96NF6 230 aa13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 KIAA1549LQ6ZVL6 1849 aa13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 ICE1Q9Y2F5 2266 aa13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 OCC1Q8TAD7 63 aa13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 A0A0U1RRA0 63 aa13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 DEFB104AQ8WTQ1 72 aa13.32□□□□□ -0.28
SYNGAP1-202ENST00000418600 SIGLEC8Q9NYZ4 499 aa13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 OBSL1O75147 1896 aa13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 A8MXK9 166 aa13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 RHOHQ15669 191 aa13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 IGKV1-6A0A0C4DH72 117 aa13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 ZNF479Q96JC4 524 aa13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 RSPO1Q2MKA7 263 aaPredicted RBP13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 LHFPL1Q86WI0 220 aa13.31□□□□□ -0.28
SYNGAP1-202ENST00000418600 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 IGHV3-64A0A075B6Q5 118 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 LY6G5BQ8NDX9 201 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 GAGE6Q13070 117 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 SH2D6Q7Z4S9 175 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 MRPL23Q16540 153 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 LY96Q9Y6Y9 160 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 UBE2CO00762 179 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 NKAPP1Q8N9T2 125 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 TMEM242Q9NWH2 141 aa13.3□□□□□ -0.28
SYNGAP1-202ENST00000418600 H3BRN7 92 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 Q8N9W7 124 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 RNF126Q9BV68 326 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 IGHG2P01859 326 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 ANGP03950 147 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 ZNRF2Q8NHG8 242 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 LYZL1Q6UWQ5 148 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 TMEM243Q9BU79 118 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 TMEM14EPQ6UXP3 125 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 CACNA1HO95180 2353 aa13.29□□□□□ -0.28
SYNGAP1-202ENST00000418600 ZNF491Q8N8L2 437 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms