RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 SS18Q15532 418 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 MINOS1Q5TGZ0 78 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 TMEM141Q96I45 108 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 MINOS1-NBL1R4GNA1 71 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 Q6ZR03 302 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 C8orf86Q6ZUL3 223 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 MAPK1IP1LQ8NDC0 245 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 MMP23AO75900 390 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 RNF5Q99942 180 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 E7EQL1 145 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 C15orf53Q8NAA6 179 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 PRO1854Q9UHT4 67 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 ZSWIM8A7E2V4 1837 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 MED12Q93074 2177 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 CLPSL2Q6UWE3 100 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 KIAA2026Q5HYC2 2103 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 A0A096LPF7 62 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 SDHAF1A6NFY7 115 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 GATA1P15976 413 aaPredicted RBP9.61□□□□□ -0.87
UBR4-205ENST00000417040 FAM120AOSQ5T036 256 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 ARTNQ5T4W7 220 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 ZNF833PQ6ZTB9 187 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 WT1-ASQ06250 92 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
UBR4-205ENST00000417040 PRR25Q96S07 402 aa9.61□□□□□ -0.87
UBR4-205ENST00000417040 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 GAGE6Q13070 117 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 PLXNA3P51805 1871 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 HELZP42694 1942 aaKnown RBP9.6□□□□□ -0.87
UBR4-205ENST00000417040 CABIN1Q9Y6J0 2220 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 BPESC1Q9GZL8 116 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 H3BRN7 92 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 M0R1W7 72 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 CDKN1BP46527 198 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 KMT2EQ8IZD2 1858 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 PDE6HQ13956 83 aa9.6□□□□□ -0.87
UBR4-205ENST00000417040 VWA8A3KMH1 1905 aa9.59□□□□□ -0.87
UBR4-205ENST00000417040 CT83Q5H943 113 aa9.59□□□□□ -0.87
UBR4-205ENST00000417040 DAZ1Q9NQZ3 744 aaKnown RBP9.59□□□□□ -0.87
UBR4-205ENST00000417040 CRYBA4P53673 196 aa9.59□□□□□ -0.87
UBR4-205ENST00000417040 NDUFA12Q9UI09 145 aa9.59□□□□□ -0.87
UBR4-205ENST00000417040 PRB2P02812 416 aaPredicted RBP9.59□□□□□ -0.87
UBR4-205ENST00000417040 C17orf82Q86X59 251 aaPredicted RBP9.59□□□□□ -0.87
UBR4-205ENST00000417040 RNASE8Q8TDE3 154 aaKnown RBP9.59□□□□□ -0.87
UBR4-205ENST00000417040 ZNRF2Q8NHG8 242 aa9.59□□□□□ -0.87
UBR4-205ENST00000417040 THADAQ6YHU6 1953 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 F8WEM9 126 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 CFHR4Q92496 578 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 GNRH2O43555 120 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 RSPO1Q2MKA7 263 aaPredicted RBP9.58□□□□□ -0.88
UBR4-205ENST00000417040 SDK2Q58EX2 2172 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 GNLYP22749 145 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 UBE2DNLQ8IWF7 75 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 FAM231DQ6ZW35 169 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 VOPP1Q96AW1 172 aa9.58□□□□□ -0.88
UBR4-205ENST00000417040 PRR30Q53SZ7 412 aaPredicted RBP9.57□□□□□ -0.88
UBR4-205ENST00000417040 C15orf65H3BRN8 121 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 LTAP01374 205 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 C3orf56Q8N813 242 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 TEX48A0A1B0GUV7 120 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 ANKRD29Q8N6D5 301 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 PROK2Q9HC23 129 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 F6UB75 175 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 J3QQQ9 107 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 CRLF1O75462 422 aa9.57□□□□□ -0.88
UBR4-205ENST00000417040 GAGE7O76087 117 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 GAGE12FP0CL80 117 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 GAGE12GP0CL81 117 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 GAGE12IP0CL82 117 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 FOXE3Q13461 319 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 RBMY1FQ15415 496 aaKnown RBP9.56□□□□□ -0.88
UBR4-205ENST00000417040 TPRP12270 2363 aaKnown RBP9.56□□□□□ -0.88
UBR4-205ENST00000417040 KIR2DL5BA0A0G2JN68 375 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 KIR2DL5BA0A0G2JPC4 375 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 KIR2DL5AQ8N109 375 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 LTBP1Q14766 1721 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 EGR2P11161 476 aaPredicted RBP9.56□□□□□ -0.88
UBR4-205ENST00000417040 LMO1P25800 156 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 F8VRH5 84 aa9.56□□□□□ -0.88
UBR4-205ENST00000417040 FAM110DQ8TAY7 271 aaPredicted RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 TCF20Q9UGU0 1960 aaKnown RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 MBD3L4A6NDZ8 208 aaPredicted RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 MBD3L3A6NE82 208 aaPredicted RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 MBD3L5A6NJ08 208 aaPredicted RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 PLA2G5P39877 138 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 RPL32P62910 135 aaKnown RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 MBD3L2Q8NHZ7 208 aaPredicted RBP9.55□□□□□ -0.88
UBR4-205ENST00000417040 LYPD6BQ8NI32 183 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 TSC2P49815 1807 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 DOCK9Q9BZ29 2069 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 PSCAO43653 123 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 SMIM2Q9BVW6 85 aa9.55□□□□□ -0.88
UBR4-205ENST00000417040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms