RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RANP62826 216 aaKnown RBP13.39□□□□□ -0.27
TRIM56-202ENST00000412507 INO80EQ8NBZ0 244 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-202ENST00000412507 VGLL1Q99990 258 aa13.39□□□□□ -0.27
TRIM56-202ENST00000412507 A0A1W2PPV4 95 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 RNF222A6NCQ9 220 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 LYRM9A8MSI8 78 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 HTN3P15516 51 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 ATP6V0CP27449 155 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 C9orf47Q6ZRZ4 202 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 OR10G4Q8NGN3 311 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 OR10G9Q8NGN4 311 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 OR10G7Q8NGN6 311 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 C16orf74Q96GX8 76 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 Q9H3A6 140 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 TNFSF18Q9UNG2 199 aa13.38□□□□□ -0.27
TRIM56-202ENST00000412507 HMGB3O15347 200 aaKnown RBP13.37□□□□□ -0.27
TRIM56-202ENST00000412507 TMEM78Q5T7P6 136 aa13.37□□□□□ -0.27
TRIM56-202ENST00000412507 LYPD1Q8N2G4 141 aa13.37□□□□□ -0.27
TRIM56-202ENST00000412507 OR2G3Q8NGZ4 309 aa13.37□□□□□ -0.27
TRIM56-202ENST00000412507 FAM19A4Q96LR4 140 aa13.37□□□□□ -0.27
TRIM56-202ENST00000412507 PSMG3Q9BT73 122 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-202ENST00000412507 G3V3Q6 166 aa13.36□□□□□ -0.27
TRIM56-202ENST00000412507 C1QBP02746 253 aa13.36□□□□□ -0.27
TRIM56-202ENST00000412507 SLC25A5P05141 298 aaKnown RBP13.36□□□□□ -0.27
TRIM56-202ENST00000412507 DEFB130BP0DP73 79 aa13.36□□□□□ -0.27
TRIM56-202ENST00000412507 DEFB130AP0DP74 79 aa13.36□□□□□ -0.27
TRIM56-202ENST00000412507 ZNF493Q6ZR52 646 aa13.36□□□□□ -0.27
TRIM56-202ENST00000412507 RNASE8Q8TDE3 154 aaKnown RBP13.36□□□□□ -0.27
TRIM56-202ENST00000412507 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
TRIM56-202ENST00000412507 NDUFAF3Q9BU61 184 aa13.36□□□□□ -0.27
TRIM56-202ENST00000412507 C7orf71A4D174 169 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 KLLNB2CW77 178 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 CSN1S1P47710 185 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
TRIM56-202ENST00000412507 CD300CQ08708 224 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 BTN1A1Q13410 526 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 ZFP69Q49AA0 526 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 RPL7L1Q6DKI1 246 aaKnown RBP13.35□□□□□ -0.27
TRIM56-202ENST00000412507 PQLC2Q6ZP29 291 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 SH3BGRL3Q9H299 93 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 ZNF492Q9P255 531 aa13.35□□□□□ -0.27
TRIM56-202ENST00000412507 TIMM8BQ9Y5J9 83 aaPredicted RBP13.35□□□□□ -0.27
TRIM56-202ENST00000412507 DNAH6Q9C0G6 4158 aa13.34□□□□□ -0.27
TRIM56-202ENST00000412507 SMLR1H3BR10 107 aa13.34□□□□□ -0.27
TRIM56-202ENST00000412507 GPX1P07203 203 aa13.34□□□□□ -0.27
TRIM56-202ENST00000412507 CRISP2P16562 243 aa13.34□□□□□ -0.27
TRIM56-202ENST00000412507 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
TRIM56-202ENST00000412507 CCDC28AQ8IWP9 274 aa13.34□□□□□ -0.27
TRIM56-202ENST00000412507 HYLS1Q96M11 299 aa13.34□□□□□ -0.27
TRIM56-202ENST00000412507 NOP10Q9NPE3 64 aaKnown RBP13.34□□□□□ -0.27
TRIM56-202ENST00000412507 PGPA6NDG6 321 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 HMSDA8MTL9 139 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 ZNF138P52744 262 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 SERF2P84101 59 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 ZFAND2AQ8N6M9 145 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 Q8TAT8 98 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 PYGO2Q9BRQ0 406 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 OTORQ9NRC9 128 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 NACAE9PAV3 2078 aa13.33□□□□□ -0.28
TRIM56-202ENST00000412507 EPPK1P58107 5090 aaKnown RBP13.33□□□□□ -0.28
TRIM56-202ENST00000412507 BORCS7-ASMTA0A0B4J1R7 106 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 DIRC3C9JPN6 131 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 ZNF324O75467 553 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-202ENST00000412507 STAG3L2P0CL84 134 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 STAG3L3P0CL85 134 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 ARL14EPLP0DKL9 152 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 PRR9Q5T870 116 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 RXFP4Q8TDU9 374 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 RAB24Q969Q5 203 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 FAM210BQ96KR6 192 aa13.32□□□□□ -0.28
TRIM56-202ENST00000412507 RBAKDNA6NC62 111 aa13.31□□□□□ -0.28
TRIM56-202ENST00000412507 ARPC5O15511 151 aa13.31□□□□□ -0.28
TRIM56-202ENST00000412507 MBP02144 154 aa13.31□□□□□ -0.28
TRIM56-202ENST00000412507 NMBP08949 121 aa13.31□□□□□ -0.28
TRIM56-202ENST00000412507 RPH3ALQ9UNE2 315 aa13.31□□□□□ -0.28
TRIM56-202ENST00000412507 SNURFLB1AK76 121 aa13.3□□□□□ -0.28
TRIM56-202ENST00000412507 FAM74A1Q5RGS3 127 aa13.3□□□□□ -0.28
TRIM56-202ENST00000412507 TMEM88Q6PEY1 159 aa13.3□□□□□ -0.28
TRIM56-202ENST00000412507 Q6ZQT7 251 aa13.3□□□□□ -0.28
TRIM56-202ENST00000412507 CMTM2Q8TAZ6 248 aa13.3□□□□□ -0.28
TRIM56-202ENST00000412507 GNPNAT1Q96EK6 184 aaPredicted RBP13.3□□□□□ -0.28
TRIM56-202ENST00000412507 CBY3A6NI87 242 aa13.29□□□□□ -0.28
TRIM56-202ENST00000412507 ATP5G1P05496 136 aa13.29□□□□□ -0.28
TRIM56-202ENST00000412507 ATP5G3P48201 142 aa13.29□□□□□ -0.28
TRIM56-202ENST00000412507 SSX7Q7RTT5 188 aa13.29□□□□□ -0.28
TRIM56-202ENST00000412507 EIF4E3Q8N5X7 224 aaKnown RBP13.29□□□□□ -0.28
TRIM56-202ENST00000412507 OR11H4Q8NGC9 324 aa13.29□□□□□ -0.28
TRIM56-202ENST00000412507 ACTR3CQ9C0K3 210 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-202ENST00000412507 DNAH10Q8IVF4 4471 aa13.29□□□□□ -0.28
TRIM56-202ENST00000412507 TRBV7-9A0A0J9YWB2 115 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 F5H768 121 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 P0DMU3 169 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 FAM231AP0DMU4 169 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 FAM231CP0DMU5 169 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 GCHFRP30047 84 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 ZNF345Q14585 488 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
TRIM56-202ENST00000412507 MUC4Q99102 2169 aa13.27□□□□□ -0.28
TRIM56-202ENST00000412507 A0A0D9SG52 128 aa13.27□□□□□ -0.29
TRIM56-202ENST00000412507 TAAR5O14804 337 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms