RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ARHGEF12Q9NZN5 1544 aa2.58□□□□□ -2
LSM5-205ENST00000409952 A0A0G2JQZ4 141 aa2.57□□□□□ -2
LSM5-205ENST00000409952 LOC107986453A0A1B0GWG9 222 aa2.57□□□□□ -2
LSM5-205ENST00000409952 SDHAF1A6NFY7 115 aa2.57□□□□□ -2
LSM5-205ENST00000409952 FAM25AB3EWG3 89 aa2.57□□□□□ -2
LSM5-205ENST00000409952 FAM25CB3EWG5 89 aa2.57□□□□□ -2
LSM5-205ENST00000409952 FAM25GB3EWG6 89 aa2.57□□□□□ -2
LSM5-205ENST00000409952 ZNF670-ZNF695F2Z2N8 137 aa2.57□□□□□ -2
LSM5-205ENST00000409952 CRPP02741 224 aa2.57□□□□□ -2
LSM5-205ENST00000409952 SLC25A4P12235 298 aa2.57□□□□□ -2
LSM5-205ENST00000409952 HIST1H1BP16401 226 aaKnown RBP2.57□□□□□ -2
LSM5-205ENST00000409952 SNRPD3P62318 126 aaKnown RBP2.57□□□□□ -2
LSM5-205ENST00000409952 IGFL3Q6UXB1 125 aa2.57□□□□□ -2
LSM5-205ENST00000409952 LINC00304Q8N9R0 145 aa2.57□□□□□ -2
LSM5-205ENST00000409952 CLEC2BQ92478 149 aa2.57□□□□□ -2
LSM5-205ENST00000409952 FKBP11Q9NYL4 201 aa2.57□□□□□ -2
LSM5-205ENST00000409952 FGD6Q6ZV73 1430 aa2.57□□□□□ -2
LSM5-205ENST00000409952 POLA1P09884 1462 aaPredicted RBP2.57□□□□□ -2
LSM5-205ENST00000409952 KIF14Q15058 1648 aa2.57□□□□□ -2
LSM5-205ENST00000409952 BIVM-ERCC5R4GMW8 1640 aa2.57□□□□□ -2
LSM5-205ENST00000409952 CHD8Q9HCK8 2581 aa2.56□□□□□ -2
LSM5-205ENST00000409952 HEATR5AQ86XA9 2040 aa2.56□□□□□ -2
LSM5-205ENST00000409952 MALRD1Q5VYJ5 2156 aa2.56□□□□□ -2
LSM5-205ENST00000409952 E7EUB6 86 aa2.56□□□□□ -2
LSM5-205ENST00000409952 TRACP01848 142 aa2.56□□□□□ -2
LSM5-205ENST00000409952 CCL4P13236 92 aa2.56□□□□□ -2
LSM5-205ENST00000409952 DSCR4P56555 118 aaPredicted RBP2.56□□□□□ -2
LSM5-205ENST00000409952 CDK6Q00534 326 aa2.56□□□□□ -2
LSM5-205ENST00000409952 RAB37Q96AX2 223 aa2.56□□□□□ -2
LSM5-205ENST00000409952 TMEM191AQ9H0A3 160 aa2.56□□□□□ -2
LSM5-205ENST00000409952 DNAJC15Q9Y5T4 150 aa2.56□□□□□ -2
LSM5-205ENST00000409952 ZFYVE16Q7Z3T8 1539 aa2.56□□□□□ -2
LSM5-205ENST00000409952 RGPD1P0DJD0 1748 aa2.56□□□□□ -2
LSM5-205ENST00000409952 SPHKAPQ2M3C7 1700 aa2.56□□□□□ -2
LSM5-205ENST00000409952 NUP98P52948 1817 aa2.56□□□□□ -2
LSM5-205ENST00000409952 A0A087WSZ3 146 aa2.55□□□□□ -2
LSM5-205ENST00000409952 TRAV12-1A0A0B4J245 112 aa2.55□□□□□ -2
LSM5-205ENST00000409952 TPRXLQ17RH7 258 aa2.55□□□□□ -2
LSM5-205ENST00000409952 DEFB113Q30KQ7 82 aa2.55□□□□□ -2
LSM5-205ENST00000409952 GLIPR1L1Q6UWM5 242 aa2.55□□□□□ -2
LSM5-205ENST00000409952 NRKQ7Z2Y5 1582 aa2.55□□□□□ -2
LSM5-205ENST00000409952 RPS19BP1Q86WX3 136 aaKnown RBP2.55□□□□□ -2
LSM5-205ENST00000409952 LINC00311Q8N616 119 aa2.55□□□□□ -2
LSM5-205ENST00000409952 MYO3AQ8NEV4 1616 aa2.55□□□□□ -2
LSM5-205ENST00000409952 TMEM254Q8TBM7 123 aa2.55□□□□□ -2
LSM5-205ENST00000409952 MUCL1Q96DR8 90 aa2.55□□□□□ -2
LSM5-205ENST00000409952 NABP2Q9BQ15 211 aa2.55□□□□□ -2
LSM5-205ENST00000409952 CST9LQ9H4G1 147 aa2.55□□□□□ -2
LSM5-205ENST00000409952 RAPGEF2Q9Y4G8 1499 aa2.55□□□□□ -2
LSM5-205ENST00000409952 MYH10P35580 1976 aa2.54□□□□□ -2
LSM5-205ENST00000409952 WIZO95785 1651 aa2.54□□□□□ -2
LSM5-205ENST00000409952 MYOM1P52179 1685 aa2.54□□□□□ -2
LSM5-205ENST00000409952 ADGRB2O60241 1585 aa2.54□□□□□ -2
LSM5-205ENST00000409952 CEP170BQ9Y4F5 1589 aaPredicted RBP2.54□□□□□ -2
LSM5-205ENST00000409952 IGKV3D-11A0A0A0MRZ8 115 aa2.54□□□□□ -2
LSM5-205ENST00000409952 P0C880 135 aa2.54□□□□□ -2
LSM5-205ENST00000409952 ZNF25P17030 456 aaPredicted RBP2.54□□□□□ -2
LSM5-205ENST00000409952 GUCA1AP43080 201 aaPredicted RBP2.54□□□□□ -2
LSM5-205ENST00000409952 PLGLB1Q02325 96 aa2.54□□□□□ -2
LSM5-205ENST00000409952 CIRBPQ14011 172 aaKnown RBP2.54□□□□□ -2
LSM5-205ENST00000409952 ELOBQ15370 118 aa2.54□□□□□ -2
LSM5-205ENST00000409952 OR5AK2Q8NH90 309 aa2.54□□□□□ -2
LSM5-205ENST00000409952 METTL1Q9UBP6 276 aaKnown RBP2.54□□□□□ -2
LSM5-205ENST00000409952 GNG8Q9UK08 70 aa2.54□□□□□ -2
LSM5-205ENST00000409952 PIEZO1Q92508 2521 aa2.54□□□□□ -2
LSM5-205ENST00000409952 EML6Q6ZMW3 1958 aa2.54□□□□□ -2
LSM5-205ENST00000409952 FER1L6Q2WGJ9 1857 aa2.54□□□□□ -2
LSM5-205ENST00000409952 MYO16Q9Y6X6 1858 aa2.54□□□□□ -2
LSM5-205ENST00000409952 VIRMAQ69YN4 1812 aaKnown RBP2.54□□□□□ -2
LSM5-205ENST00000409952 N4BP2Q86UW6 1770 aaPredicted RBP2.54□□□□□ -2
LSM5-205ENST00000409952 ADAMTS12P58397 1594 aa2.53□□□□□ -2
LSM5-205ENST00000409952 COL1A1P02452 1464 aaPredicted RBP2.53□□□□□ -2
LSM5-205ENST00000409952 TMEM2Q9UHN6 1383 aa2.53□□□□□ -2
LSM5-205ENST00000409952 ATP6V1G2-DDX39BF2Z307 99 aa2.53□□□□□ -2
LSM5-205ENST00000409952 CDC42EP2O14613 210 aa2.53□□□□□ -2
LSM5-205ENST00000409952 CD14P08571 375 aa2.53□□□□□ -2
LSM5-205ENST00000409952 PCBD1P61457 104 aa2.53□□□□□ -2
LSM5-205ENST00000409952 ASB16-AS1Q495Z4 193 aa2.53□□□□□ -2
LSM5-205ENST00000409952 IZUMO2Q6UXV1 221 aa2.53□□□□□ -2
LSM5-205ENST00000409952 ARPINQ7Z6K5 226 aa2.53□□□□□ -2
LSM5-205ENST00000409952 C10orf111Q8N326 155 aa2.53□□□□□ -2
LSM5-205ENST00000409952 SFT2D1Q8WV19 159 aa2.53□□□□□ -2
LSM5-205ENST00000409952 PSMF1Q92530 271 aa2.53□□□□□ -2
LSM5-205ENST00000409952 SDF2Q99470 211 aa2.53□□□□□ -2
LSM5-205ENST00000409952 NAA38Q9BRA0 125 aaKnown RBP2.53□□□□□ -2
LSM5-205ENST00000409952 SLC35B3Q9H1N7 401 aa2.53□□□□□ -2
LSM5-205ENST00000409952 CCDC167Q9P0B6 97 aa2.53□□□□□ -2
LSM5-205ENST00000409952 ANKRD31Q8N7Z5 1873 aa2.53□□□□□ -2
LSM5-205ENST00000409952 TRANK1O15050 2925 aa2.53□□□□□ -2
LSM5-205ENST00000409952 ANKRD11Q6UB99 2663 aaPredicted RBP2.53□□□□□ -2.01
LSM5-205ENST00000409952 SBF1O95248 1867 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 CPAMD8Q8IZJ3 1885 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 SETXQ7Z333 2677 aaKnown RBP2.52□□□□□ -2.01
LSM5-205ENST00000409952 SHANK1Q9Y566 2161 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 TRBV20-1A0A075B6N2 111 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 PNMA8CA0A1B0GUJ8 204 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 TCRBV4S1A1TA0A5B7 111 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 CD3DP04234 171 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 CKS2P33552 79 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 ETV6P41212 452 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms