RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 OR5C1Q8NGR4 320 aa10.27□□□□□ -0.76
CBX3-203ENST00000409747 BLNKQ8WV28 456 aa10.27□□□□□ -0.76
CBX3-203ENST00000409747 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.76
CBX3-203ENST00000409747 NMES1Q9C002 83 aa10.27□□□□□ -0.76
CBX3-203ENST00000409747 PRAF2O60831 178 aa10.27□□□□□ -0.77
CBX3-203ENST00000409747 NMBP08949 121 aa10.27□□□□□ -0.77
CBX3-203ENST00000409747 CYCSP99999 105 aaKnown RBP10.27□□□□□ -0.77
CBX3-203ENST00000409747 ERCC8Q13216 396 aa10.27□□□□□ -0.77
CBX3-203ENST00000409747 THAP6Q8TBB0 222 aa10.27□□□□□ -0.77
CBX3-203ENST00000409747 FAM19A4Q96LR4 140 aa10.27□□□□□ -0.77
CBX3-203ENST00000409747 HOXA5P20719 270 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 NHLH2Q02577 135 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 TMEM78Q5T7P6 136 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 EXOC3-AS1Q8N2X6 119 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 EIF4E3Q8N5X7 224 aaKnown RBP10.26□□□□□ -0.77
CBX3-203ENST00000409747 C18orf15Q96N68 181 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 SLC25A2Q9BXI2 301 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 MRPL32Q9BYC8 188 aaKnown RBP10.26□□□□□ -0.77
CBX3-203ENST00000409747 TMPRSS5Q9H3S3 457 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 Q9H8V8 135 aa10.26□□□□□ -0.77
CBX3-203ENST00000409747 TRGV2A0A075B6R0 118 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 A0A0J9YY99 117 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 GPX1P07203 203 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 CRISP2P16562 243 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 ICAM4Q14773 271 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 GCSAMLQ5JQS6 135 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 Q6ZTI0 123 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 ZNF575Q86XF7 245 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 UPK3BQ9BT76 320 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
CBX3-203ENST00000409747 C17orf112F2Z3M2 114 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 ZNF324O75467 553 aaPredicted RBP10.24□□□□□ -0.77
CBX3-203ENST00000409747 UPK1BO75841 260 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 NBEAP1P0C6P0 100 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 TNP2Q05952 138 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 BTN1A1Q13410 526 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 LRRC37A5PQ49AS3 106 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 MIR17HGQ75NE6 70 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 OR51M1Q9H341 326 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 GSN-AS1Q9NRJ2 163 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 RYR1P21817 5038 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
CBX3-203ENST00000409747 IBA57Q5T440 356 aaKnown RBP10.24□□□□□ -0.77
CBX3-203ENST00000409747 FAM122CQ6P4D5 195 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 FAM167A-AS1Q96KT0 104 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 WDR61Q9GZS3 305 aaKnown RBP10.24□□□□□ -0.77
CBX3-203ENST00000409747 OR5AC2Q9NZP5 309 aa10.24□□□□□ -0.77
CBX3-203ENST00000409747 IGKV2-40A0A087WW87 121 aaPredicted RBP10.23□□□□□ -0.77
CBX3-203ENST00000409747 TRGV1A0A0A0MS02 117 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 A0A1W2PPQ1 181 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 RGS13O14921 159 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 SIX6O95475 246 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 IGKV2D-40P01614 121 aaPredicted RBP10.23□□□□□ -0.77
CBX3-203ENST00000409747 PET100P0DJ07 73 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 TCL1AP56279 114 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 CD300CQ08708 224 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 PAXXQ9BUH6 204 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 Q9H3A6 140 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 FUT9Q9Y231 359 aa10.23□□□□□ -0.77
CBX3-203ENST00000409747 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
CBX3-203ENST00000409747 TRBV7-9A0A0J9YWB2 115 aa10.22□□□□□ -0.77
CBX3-203ENST00000409747 C16orf90A8MZG2 172 aa10.22□□□□□ -0.77
CBX3-203ENST00000409747 BTF3P20290 206 aaKnown RBP10.22□□□□□ -0.77
CBX3-203ENST00000409747 ARPC5LQ9BPX5 153 aa10.22□□□□□ -0.77
CBX3-203ENST00000409747 ZNF492Q9P255 531 aa10.22□□□□□ -0.77
CBX3-203ENST00000409747 OR7C2O60412 319 aa10.21□□□□□ -0.77
CBX3-203ENST00000409747 OR10J4P0C629 311 aa10.21□□□□□ -0.77
CBX3-203ENST00000409747 CSN1S1P47710 185 aa10.21□□□□□ -0.77
CBX3-203ENST00000409747 ESRGQ1W209 222 aa10.21□□□□□ -0.77
CBX3-203ENST00000409747 ZFAND2AQ8N6M9 145 aa10.21□□□□□ -0.77
CBX3-203ENST00000409747 FXYD5Q96DB9 178 aa10.21□□□□□ -0.77
CBX3-203ENST00000409747 ATP5SQ99766 215 aa10.21□□□□□ -0.77
CBX3-203ENST00000409747 IGHV1OR15-1A0A075B7D0 117 aa10.21□□□□□ -0.78
CBX3-203ENST00000409747 INMT-MINDY4F8WBC2 141 aa10.21□□□□□ -0.78
CBX3-203ENST00000409747 SPINK4O60575 86 aa10.21□□□□□ -0.78
CBX3-203ENST00000409747 ZNF138P52744 262 aa10.21□□□□□ -0.78
CBX3-203ENST00000409747 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.78
CBX3-203ENST00000409747 VGLL1Q99990 258 aa10.21□□□□□ -0.78
CBX3-203ENST00000409747 H0YIZ8 118 aa10.2□□□□□ -0.78
CBX3-203ENST00000409747 PPP1R1CQ8WVI7 109 aa10.2□□□□□ -0.78
CBX3-203ENST00000409747 PHYHIPLQ96FC7 376 aa10.2□□□□□ -0.78
CBX3-203ENST00000409747 ST6GAL2Q96JF0 529 aa10.2□□□□□ -0.78
CBX3-203ENST00000409747 KLF12Q9Y4X4 402 aa10.2□□□□□ -0.78
CBX3-203ENST00000409747 A0A096LPF7 62 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 RBAKDNA6NC62 111 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 TAS2R45P59539 299 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 UBE2L3P68036 154 aaKnown RBP10.19□□□□□ -0.78
CBX3-203ENST00000409747 ZNF415Q09FC8 603 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 SLAQ13239 276 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 KHDC3LQ587J8 217 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 VSIG2Q96IQ7 327 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 MUC4Q99102 2169 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 SSNA1O43805 119 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 CDK2AP2O75956 126 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 IFNA5P01569 189 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 H2BFSP57053 126 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 DEFA1P59665 94 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms