RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 IGHV7-81A0A0B4J1V7 117 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 C2orf70A6NJV1 201 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 LINC00473A8K010 186 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.89□□□□□ -1.47
SH3D19-203ENST00000409598 CFPP27918 469 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 RHOHQ15669 191 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 C10orf126Q8N4M7 172 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 SLC17A3O00476 420 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 SEC11AP67812 179 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 Q8N9W7 124 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 SHANK2-AS3Q9BTD1 123 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 IGHG4P01861 327 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 RNASE2P10153 161 aaKnown RBP5.89□□□□□ -1.47
SH3D19-203ENST00000409598 CFHR3Q02985 330 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 CD300EQ496F6 205 aaPredicted RBP5.89□□□□□ -1.47
SH3D19-203ENST00000409598 LHFPL1Q86WI0 220 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 PGLYRP4Q96LB8 373 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 IL36BQ9NZH7 164 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 C15orf65H3BRN8 121 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 C11orf53Q8IXP5 236 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 FAM19A2Q8N3H0 131 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 PYGO2Q9BRQ0 406 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 SCRT1Q9BWW7 348 aa5.89□□□□□ -1.47
SH3D19-203ENST00000409598 TRBV25-1A0A075B6N4 114 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 MIR17HGQ75NE6 70 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 MRPL52Q86TS9 123 aaKnown RBP5.88□□□□□ -1.47
SH3D19-203ENST00000409598 C1orf43Q9BWL3 253 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 NDUFA4L2Q9NRX3 87 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 SCN8AQ9UQD0 1980 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 TRAV10A0A0B4J240 114 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 ZFAND6Q6FIF0 208 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 LY6G5BQ8NDX9 201 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 ZNF502Q8TBZ5 544 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 HIVEP3Q5T1R4 2406 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 IGKV2D-24A0A075B6R9 120 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 A0A1W2PRE2 83 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 LYRM7Q5U5X0 104 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 EPDR1Q9UM22 224 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 SMIM9A6NGZ8 99 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 MMP23AO75900 390 aa5.88□□□□□ -1.47
SH3D19-203ENST00000409598 LGALS3P17931 250 aaKnown RBP5.88□□□□□ -1.47
SH3D19-203ENST00000409598 NXT2Q9NPJ8 142 aaKnown RBP5.88□□□□□ -1.47
SH3D19-203ENST00000409598 ATP5LO75964 103 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 UBE2V1Q13404 147 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 PRELID3AQ96N28 172 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 TMEM70Q9BUB7 260 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 IGKV1D-8A0A087WSZ0 117 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 QRFPP83859 136 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 POLR3KQ9Y2Y1 108 aaPredicted RBP5.87□□□□□ -1.47
SH3D19-203ENST00000409598 COX11Q9Y6N1 276 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 PRRC2AP48634 2157 aaKnown RBP5.87□□□□□ -1.47
SH3D19-203ENST00000409598 SRSF2Q01130 221 aaKnown RBP5.87□□□□□ -1.47
SH3D19-203ENST00000409598 LYPD6Q86Y78 171 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 MS4A6AQ9H2W1 248 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 VCX2Q9H322 139 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 WDR83OSQ9Y284 106 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 TRAV3A0A0B4J244 114 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 ERCC8Q13216 396 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 OR13C6PQ8NH95 151 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 ORAOV1Q8WV07 137 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 VSIRQ9H7M9 311 aa5.87□□□□□ -1.47
SH3D19-203ENST00000409598 CEP192Q8TEP8 1941 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 LINC01548A6NM66 108 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 RPP25LQ8N5L8 163 aaKnown RBP5.86□□□□□ -1.47
SH3D19-203ENST00000409598 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 OBSL1O75147 1896 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 MED13LQ71F56 2210 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 A0A1B0GUT8 65 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 TMEM238LA0A1B0GVL6 79 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 ZNF876PQ49A33 203 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 PMCHL2Q9BQD1 86 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 DSCAMO60469 2012 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 H3BVH4 76 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 SNAI2O43623 268 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 P0DMU3 169 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 FAM231AP0DMU4 169 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 FAM231CP0DMU5 169 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 GAGE1Q13065 139 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 DERL1Q9BUN8 251 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 KIAA1549LQ6ZVL6 1849 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 SCO2A0A1W2PP80 73 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 GAGE12JA6NER3 117 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 SLC25A20O43772 301 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 GAGE4Q13068 117 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 GAGE5Q13069 117 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 GAGE13Q4V321 117 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 MTURNQ8N3F0 131 aa5.86□□□□□ -1.47
SH3D19-203ENST00000409598 TRAV9-1A0A075B6T8 112 aa5.85□□□□□ -1.47
SH3D19-203ENST00000409598 IGKV2-40A0A087WW87 121 aaPredicted RBP5.85□□□□□ -1.47
SH3D19-203ENST00000409598 A0A0J9YY99 117 aa5.85□□□□□ -1.47
SH3D19-203ENST00000409598 IGKV2D-40P01614 121 aaPredicted RBP5.85□□□□□ -1.47
SH3D19-203ENST00000409598 ID3Q02535 119 aa5.85□□□□□ -1.47
SH3D19-203ENST00000409598 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
SH3D19-203ENST00000409598 CENPWQ5EE01 88 aa5.85□□□□□ -1.47
SH3D19-203ENST00000409598 MED13Q9UHV7 2174 aa5.85□□□□□ -1.47
SH3D19-203ENST00000409598 IGKV1OR2-108A0A075B7D4 117 aa5.85□□□□□ -1.47
SH3D19-203ENST00000409598 IGHV3-73A0A0B4J1V6 119 aa5.85□□□□□ -1.47
SH3D19-203ENST00000409598 IGLV1-47P01700 117 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 237.4 ms