RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 A8MWP6 167 aa15.82■□□□□ 0.12
USP39-203ENST00000409470 LINC00310P59036 64 aa15.82■□□□□ 0.12
USP39-203ENST00000409470 MRPL53Q96EL3 112 aaKnown RBP15.82■□□□□ 0.12
USP39-203ENST00000409470 TMSB15BA0A087X1C1 80 aa15.82■□□□□ 0.12
USP39-203ENST00000409470 TPPP3Q9BW30 176 aa15.82■□□□□ 0.12
USP39-203ENST00000409470 ESDP10768 282 aa15.81■□□□□ 0.12
USP39-203ENST00000409470 BMI1P35226 326 aa15.81■□□□□ 0.12
USP39-203ENST00000409470 JOSD1Q15040 202 aaPredicted RBP15.81■□□□□ 0.12
USP39-203ENST00000409470 CLEC5AQ9NY25 188 aa15.81■□□□□ 0.12
USP39-203ENST00000409470 A0A1B0GUT8 65 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 HAX1O00165 279 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 S100A12P80511 92 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 TM4SF20Q53R12 229 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 PRR31Q5SQ13 230 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 Q6AWC8 147 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 PRDM13Q9H4Q3 707 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 ZNF702PQ9H963 129 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 ZNF80P51504 273 aaPredicted RBP15.8■□□□□ 0.12
USP39-203ENST00000409470 RPL11P62913 178 aaKnown RBP15.8■□□□□ 0.12
USP39-203ENST00000409470 PAFAH1B2P68402 229 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 FAM106AQ4KMX7 169 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 DAZ1Q9NQZ3 744 aaKnown RBP15.8■□□□□ 0.12
USP39-203ENST00000409470 GSN-AS1Q9NRJ2 163 aa15.8■□□□□ 0.12
USP39-203ENST00000409470 IGHV7-4-1A0A0J9YVY3 117 aa15.79■□□□□ 0.12
USP39-203ENST00000409470 RIGQ13278 110 aa15.79■□□□□ 0.12
USP39-203ENST00000409470 TMEM78Q5T7P6 136 aa15.79■□□□□ 0.12
USP39-203ENST00000409470 BORCS7Q96B45 105 aa15.79■□□□□ 0.12
USP39-203ENST00000409470 SAMD10Q9BYL1 202 aa15.79■□□□□ 0.12
USP39-203ENST00000409470 NBPF19A0A087WUL8 3843 aa15.79■□□□□ 0.12
USP39-203ENST00000409470 RPLP1P05386 114 aaKnown RBP15.78■□□□□ 0.12
USP39-203ENST00000409470 ARMS2P0C7Q2 107 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 IL17RELQ6ZVW7 336 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 DUX5Q96PT3 197 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 RHPN1-AS1Q9BWJ2 59 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 AGPAT4-IT1Q9H0P7 198 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 TEX15Q9BXT5 2789 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 SIGLECL1Q8N7X8 197 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 C18orf32Q8TCD1 76 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 RCHY1Q96PM5 261 aa15.78■□□□□ 0.12
USP39-203ENST00000409470 ALKBH7Q9BT30 221 aaPredicted RBP15.78■□□□□ 0.12
USP39-203ENST00000409470 DNLZQ5SXM8 178 aa15.77■□□□□ 0.12
USP39-203ENST00000409470 ZNF738Q8NE65 137 aa15.77■□□□□ 0.12
USP39-203ENST00000409470 ZNF138P52744 262 aa15.77■□□□□ 0.11
USP39-203ENST00000409470 IQCJQ1A5X6 159 aa15.77■□□□□ 0.11
USP39-203ENST00000409470 GPHB5Q86YW7 130 aa15.77■□□□□ 0.11
USP39-203ENST00000409470 FABP5P3A8MUU1 101 aa15.76■□□□□ 0.11
USP39-203ENST00000409470 RPS20P60866 119 aaKnown RBP15.76■□□□□ 0.11
USP39-203ENST00000409470 FOXE3Q13461 319 aa15.76■□□□□ 0.11
USP39-203ENST00000409470 KCNS1Q96KK3 526 aa15.76■□□□□ 0.11
USP39-203ENST00000409470 C20orf173Q96LM9 149 aa15.76■□□□□ 0.11
USP39-203ENST00000409470 NRN1Q9NPD7 142 aa15.76■□□□□ 0.11
USP39-203ENST00000409470 K7EMT4 169 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 ORM1P02763 201 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 ELANEP08246 267 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 C9orf47Q6ZRZ4 202 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 SMPXQ9UHP9 88 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 IGKV3-7A0A075B6H7 116 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 A0A1B0GW15 77 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 KLF5Q13887 457 aaPredicted RBP15.75■□□□□ 0.11
USP39-203ENST00000409470 LYZL1Q6UWQ5 148 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 TEX29Q8N6K0 151 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 UFC1Q9Y3C8 167 aa15.75■□□□□ 0.11
USP39-203ENST00000409470 MXRA5Q9NR99 2828 aa15.74■□□□□ 0.11
USP39-203ENST00000409470 SOCS3O14543 225 aa15.73■□□□□ 0.11
USP39-203ENST00000409470 ITPR3Q14573 2671 aa15.73■□□□□ 0.11
USP39-203ENST00000409470 SSTP61278 116 aa15.73■□□□□ 0.11
USP39-203ENST00000409470 SRSF2Q01130 221 aaKnown RBP15.73■□□□□ 0.11
USP39-203ENST00000409470 SELENOKQ9Y6D0 94 aa15.73■□□□□ 0.11
USP39-203ENST00000409470 LOC102724200A0A096LPH7 203 aaPredicted RBP15.72■□□□□ 0.11
USP39-203ENST00000409470 GPX1P07203 203 aa15.72■□□□□ 0.11
USP39-203ENST00000409470 ZNF705DP0CH99 300 aaPredicted RBP15.72■□□□□ 0.11
USP39-203ENST00000409470 ZNF705BP0CI00 300 aaPredicted RBP15.72■□□□□ 0.11
USP39-203ENST00000409470 PMCHP20382 165 aa15.72■□□□□ 0.11
USP39-203ENST00000409470 AMTP48728 403 aa15.72■□□□□ 0.11
USP39-203ENST00000409470 SCGB1D1O95968 90 aa15.72■□□□□ 0.11
USP39-203ENST00000409470 LGALS1P09382 135 aaKnown RBP15.72■□□□□ 0.11
USP39-203ENST00000409470 EDN2P20800 178 aa15.72■□□□□ 0.11
USP39-203ENST00000409470 FER1L6-AS1Q8NA97 138 aa15.72■□□□□ 0.11
USP39-203ENST00000409470 OVOL1O14753 267 aa15.71■□□□□ 0.11
USP39-203ENST00000409470 Q6ZWC4 215 aa15.71■□□□□ 0.11
USP39-203ENST00000409470 OR10J6PQ8NGY7 276 aa15.71■□□□□ 0.11
USP39-203ENST00000409470 ZNF324O75467 553 aaPredicted RBP15.7■□□□□ 0.1
USP39-203ENST00000409470 MYOZ3Q8TDC0 251 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 UBE2E2Q96LR5 201 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 CCDC168Q8NDH2 2452 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 FAM181BA6NEQ2 426 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 SRD5A1P18405 259 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 HIST1H1AQ02539 215 aaPredicted RBP15.7■□□□□ 0.1
USP39-203ENST00000409470 Q8N2B8 174 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 GATD1Q8NB37 220 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 PPP1R14DQ9NXH3 145 aa15.7■□□□□ 0.1
USP39-203ENST00000409470 MUC21A0A0G2JKD1 596 aa15.69■□□□□ 0.1
USP39-203ENST00000409470 MUC21A0A140T8X8 626 aa15.69■□□□□ 0.1
USP39-203ENST00000409470 LINC01559Q495D7 138 aa15.69■□□□□ 0.1
USP39-203ENST00000409470 MUC21Q5SSG8 566 aa15.69■□□□□ 0.1
USP39-203ENST00000409470 RNASEKQ6P5S7 137 aaKnown RBP15.69■□□□□ 0.1
USP39-203ENST00000409470 ZNF469Q96JG9 3925 aaPredicted RBP15.69■□□□□ 0.1
USP39-203ENST00000409470 HELZ2Q9BYK8 2649 aaKnown RBP15.69■□□□□ 0.1
USP39-203ENST00000409470 CD33P20138 364 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 LINC00477Q96M19 166 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms