RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 DEFB131BA0A096LNP1 70 aa12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 H7BYZ3 331 aa12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 LY6G6CO95867 125 aa12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 CDC34P49427 236 aaPredicted RBP12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 TMEM78Q5T7P6 136 aa12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 LINC00476Q8WZB0 136 aa12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 VGLL1Q99990 258 aa12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 PLECQ15149 4684 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-206ENST00000409141 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
PDLIM2-206ENST00000409141 TAAR5O14804 337 aa12.8□□□□□ -0.36
PDLIM2-206ENST00000409141 RAB24Q969Q5 203 aa12.8□□□□□ -0.36
PDLIM2-206ENST00000409141 HYLS1Q96M11 299 aa12.8□□□□□ -0.36
PDLIM2-206ENST00000409141 SLC25A5P05141 298 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-206ENST00000409141 TCTAP57738 103 aa12.79□□□□□ -0.36
PDLIM2-206ENST00000409141 RXFP4Q8TDU9 374 aa12.79□□□□□ -0.36
PDLIM2-206ENST00000409141 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
PDLIM2-206ENST00000409141 SACSQ9NZJ4 4579 aa12.79□□□□□ -0.36
PDLIM2-206ENST00000409141 PGPA6NDG6 321 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 STAG3L2P0CL84 134 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 DAD1P61803 113 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 FAM74A1Q5RGS3 127 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 CCDC28AQ8IWP9 274 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 C16orf74Q96GX8 76 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 FAM19A4Q96LR4 140 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 ACTR3CQ9C0K3 210 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 C7orf71A4D174 169 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 RBAKDNA6NC62 111 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 LYRM9A8MSI8 78 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 GPX1P07203 203 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 RNASE4P34096 147 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 ZNF493Q6ZR52 646 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 CMTM2Q8TAZ6 248 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 ZNF492Q9P255 531 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 APLNQ9ULZ1 77 aa12.78□□□□□ -0.36
PDLIM2-206ENST00000409141 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.37
PDLIM2-206ENST00000409141 PLAC8L1A1L4L8 177 aa12.77□□□□□ -0.37
PDLIM2-206ENST00000409141 KLLNB2CW77 178 aa12.77□□□□□ -0.37
PDLIM2-206ENST00000409141 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
PDLIM2-206ENST00000409141 CRISP2P16562 243 aa12.77□□□□□ -0.37
PDLIM2-206ENST00000409141 ZNF138P52744 262 aa12.77□□□□□ -0.37
PDLIM2-206ENST00000409141 CYTL1Q9NRR1 136 aa12.77□□□□□ -0.37
PDLIM2-206ENST00000409141 ALMS1Q8TCU4 4167 aa12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 NMBP08949 121 aa12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 DEFB130BP0DP73 79 aa12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 DEFB130AP0DP74 79 aa12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 HTN3P15516 51 aa12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 CD300CQ08708 224 aa12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 TMEM263Q8WUH6 116 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 RPH3ALQ9UNE2 315 aa12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-206ENST00000409141 GCHFRP30047 84 aa12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 LGALS9CQ6DKI2 356 aa12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 KCNRGQ8N5I3 272 aa12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 OR11H4Q8NGC9 324 aa12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 Q8TAT8 98 aa12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 RNASE8Q8TDE3 154 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 PYGO2Q9BRQ0 406 aa12.75□□□□□ -0.37
PDLIM2-206ENST00000409141 HMSDA8MTL9 139 aa12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 ZNF324O75467 553 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 CXorf1O96002 111 aa12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 ZNF345Q14585 488 aa12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 AKR1C8PQ5T2L2 129 aa12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 ZFAND2AQ8N6M9 145 aa12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 ARPC5LQ9BPX5 153 aa12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-206ENST00000409141 TRBV7-9A0A0J9YWB2 115 aa12.73□□□□□ -0.37
PDLIM2-206ENST00000409141 SSX7Q7RTT5 188 aa12.73□□□□□ -0.37
PDLIM2-206ENST00000409141 ARL6IP6Q8N6S5 226 aa12.73□□□□□ -0.37
PDLIM2-206ENST00000409141 SUN5Q8TC36 379 aa12.73□□□□□ -0.37
PDLIM2-206ENST00000409141 TMEM167BQ9NRX6 74 aa12.73□□□□□ -0.37
PDLIM2-206ENST00000409141 DNAH1Q9P2D7 4330 aa12.73□□□□□ -0.37
PDLIM2-206ENST00000409141 A0A0D9SG52 128 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 PRR9Q5T870 116 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 IQCF2Q8IXL9 164 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 NDUFAF3Q9BU61 184 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 SNURFLB1AK76 121 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 ZNF726P1Q15940 193 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
PDLIM2-206ENST00000409141 CBY3A6NI87 242 aa12.71□□□□□ -0.38
PDLIM2-206ENST00000409141 GNG5P63218 68 aa12.71□□□□□ -0.38
PDLIM2-206ENST00000409141 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.38
PDLIM2-206ENST00000409141 TMED6Q8WW62 240 aa12.71□□□□□ -0.38
PDLIM2-206ENST00000409141 FAM210BQ96KR6 192 aa12.71□□□□□ -0.38
PDLIM2-206ENST00000409141 LINC00467Q9BRT7 94 aa12.71□□□□□ -0.38
PDLIM2-206ENST00000409141 LENEPQ9Y5L5 61 aa12.71□□□□□ -0.38
PDLIM2-206ENST00000409141 HYDINQ4G0P3 5121 aa12.7□□□□□ -0.38
PDLIM2-206ENST00000409141 KANTRA0A1W2PQU2 76 aa12.7□□□□□ -0.38
PDLIM2-206ENST00000409141 RGS13O14921 159 aa12.7□□□□□ -0.38
PDLIM2-206ENST00000409141 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-206ENST00000409141 Q6ZNX1 250 aa12.7□□□□□ -0.38
PDLIM2-206ENST00000409141 Q6ZQT7 251 aa12.7□□□□□ -0.38
PDLIM2-206ENST00000409141 ATP5G1P05496 136 aa12.69□□□□□ -0.38
PDLIM2-206ENST00000409141 ATP5G3P48201 142 aa12.69□□□□□ -0.38
PDLIM2-206ENST00000409141 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
PDLIM2-206ENST00000409141 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms