RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
CBX6-202ENST00000407418 IGHV4-38-2P0DP08 117 aa13.12□□□□□ -0.31
CBX6-202ENST00000407418 MRPL52Q86TS9 123 aaKnown RBP13.12□□□□□ -0.31
CBX6-202ENST00000407418 ZNRF2Q8NHG8 242 aa13.12□□□□□ -0.31
CBX6-202ENST00000407418 GFRA4Q9GZZ7 299 aa13.12□□□□□ -0.31
CBX6-202ENST00000407418 TMEM126AQ9H061 195 aa13.12□□□□□ -0.31
CBX6-202ENST00000407418 NLRC5Q86WI3 1866 aa13.12□□□□□ -0.31
CBX6-202ENST00000407418 H3BRN7 92 aa13.12□□□□□ -0.31
CBX6-202ENST00000407418 KIR3DS1Q14943 382 aa13.12□□□□□ -0.31
CBX6-202ENST00000407418 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
CBX6-202ENST00000407418 ZNF134P52741 427 aa13.11□□□□□ -0.31
CBX6-202ENST00000407418 RHOHQ15669 191 aa13.11□□□□□ -0.31
CBX6-202ENST00000407418 PIFOQ8TCI5 191 aa13.11□□□□□ -0.31
CBX6-202ENST00000407418 IGKV2D-24A0A075B6R9 120 aa13.11□□□□□ -0.31
CBX6-202ENST00000407418 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.11□□□□□ -0.31
CBX6-202ENST00000407418 NRGNQ92686 78 aa13.11□□□□□ -0.31
CBX6-202ENST00000407418 SPINK8P0C7L1 97 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 LRRC75A-AS1Q8N1F1 130 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 MPV17L2Q567V2 206 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 OR11H6Q8NGC7 330 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 GBF1Q92538 1859 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 A0A096LPF7 62 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 MYCNOSP40205 109 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 TMEM141Q96I45 108 aa13.1□□□□□ -0.31
CBX6-202ENST00000407418 TRBV19A0A075B6N1 114 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 CLPSL1A2RUU4 121 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 ANGP03950 147 aaKnown RBP13.09□□□□□ -0.31
CBX6-202ENST00000407418 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 C8orf49Q96NF6 230 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 ICE1Q9Y2F5 2266 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
CBX6-202ENST00000407418 CACNA1BQ00975 2339 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 IGKV1OR2-108A0A075B7D4 117 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 SPART-AS1P0CW21 52 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 IGHV1-24A0A0C4DH33 117 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 CENPVL3A0A0U1RRI6 287 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 C15orf65H3BRN8 121 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 DEFB136Q30KP8 78 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 LINC01551Q86U37 167 aa13.09□□□□□ -0.31
CBX6-202ENST00000407418 CACNA1EQ15878 2313 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 ANXA2RQ3ZCQ2 193 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 A0A0J9YY99 117 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 VWC2LB2RUY7 222 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 SYS1-DBNDD2H3BUS1 97 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 PMVKQ15126 192 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 NOP10Q9NPE3 64 aaKnown RBP13.08□□□□□ -0.32
CBX6-202ENST00000407418 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
CBX6-202ENST00000407418 SLURP1P55000 103 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 TRAV8-3A0A0A6YYJ7 113 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 UBE2BP63146 152 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 PYY3Q5JQD4 70 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 GAGE2AQ6NT46 116 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 DNAJC30Q96LL9 226 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 ZNF492Q9P255 531 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 SNHG12Q9BXW3 62 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 A0A0G2JRQ6 117 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 C16orf74Q96GX8 76 aa13.07□□□□□ -0.32
CBX6-202ENST00000407418 FANCMQ8IYD8 2048 aa13.06□□□□□ -0.32
CBX6-202ENST00000407418 IGKV1-6A0A0C4DH72 117 aa13.06□□□□□ -0.32
CBX6-202ENST00000407418 Q8NFD4 153 aa13.06□□□□□ -0.32
CBX6-202ENST00000407418 CHAC1Q9BUX1 264 aa13.06□□□□□ -0.32
CBX6-202ENST00000407418 CTSZQ9UBR2 303 aa13.06□□□□□ -0.32
CBX6-202ENST00000407418 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
CBX6-202ENST00000407418 FHL1Q13642 323 aa13.05□□□□□ -0.32
CBX6-202ENST00000407418 F8W735 103 aaPredicted RBP13.05□□□□□ -0.32
CBX6-202ENST00000407418 SMAD5-AS1Q9Y6J3 95 aa13.05□□□□□ -0.32
CBX6-202ENST00000407418 ARID1AO14497 2285 aa13.05□□□□□ -0.32
CBX6-202ENST00000407418 RP1P56715 2156 aa13.05□□□□□ -0.32
CBX6-202ENST00000407418 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
CBX6-202ENST00000407418 AMN1Q8IY45 258 aa13.05□□□□□ -0.32
CBX6-202ENST00000407418 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
CBX6-202ENST00000407418 DIAPH2-AS1Q14236 149 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 MRPL53Q96EL3 112 aaKnown RBP13.04□□□□□ -0.32
CBX6-202ENST00000407418 TP53TG1Q9Y2A0 90 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 COX11Q9Y6N1 276 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 IGHV3-38A0A0C4DH36 116 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 CD5LO43866 347 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 CACNA1IQ9P0X4 2223 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 PRSS29PA6NIE9 313 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 RNF152Q8N8N0 203 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 PLXNA2O75051 1894 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 ATP5G1P05496 136 aa13.04□□□□□ -0.32
CBX6-202ENST00000407418 INTS1Q8N201 2190 aaKnown RBP13.03□□□□□ -0.32
CBX6-202ENST00000407418 MMP23AO75900 390 aa13.03□□□□□ -0.32
CBX6-202ENST00000407418 PYGO2Q9BRQ0 406 aa13.03□□□□□ -0.32
CBX6-202ENST00000407418 C1orf43Q9BWL3 253 aa13.03□□□□□ -0.32
CBX6-202ENST00000407418 Q9HAA7 133 aa13.03□□□□□ -0.32
CBX6-202ENST00000407418 WIPF2Q8TF74 440 aaPredicted RBP13.02□□□□□ -0.32
CBX6-202ENST00000407418 C4orf3Q8WVX3 66 aa13.02□□□□□ -0.32
CBX6-202ENST00000407418 MRPL23Q16540 153 aaKnown RBP13.02□□□□□ -0.32
CBX6-202ENST00000407418 Q6ZRM9 215 aa13.02□□□□□ -0.32
CBX6-202ENST00000407418 NPBQ8NG41 125 aa13.02□□□□□ -0.33
CBX6-202ENST00000407418 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.33
CBX6-202ENST00000407418 RSPO3Q9BXY4 272 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms