RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR10AG1Q8NH19 301 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 ZNF256Q9Y2P7 627 aaPredicted RBP7.08□□□□□ -1.28
LIG4-202ENST00000405925 LY96Q9Y6Y9 160 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 LAMA1P25391 3075 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 TCAPO15273 167 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 CXCL1P09341 107 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 DEFB121Q5J5C9 76 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 ZNF414Q96IQ9 312 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
LIG4-202ENST00000405925 IGHV4OR15-8A0A075B7B6 117 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 A0A087WW49 117 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 F2Z2F3 143 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 F6UB75 175 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 UBE2L6O14933 153 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 CD5LO43866 347 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 APOHP02749 345 aaPredicted RBP7.07□□□□□ -1.28
LIG4-202ENST00000405925 FOXL1Q12952 345 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 C18orf15Q96N68 181 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 C11orf1Q9H5F2 150 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 TMEM242Q9NWH2 141 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 PLA2G2EQ9NZK7 142 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 TRBV24-1A0A075B6N3 115 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 IGKV3OR2-268A0A0C4DH90 116 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 AVPP01185 164 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 FOXC2Q99958 501 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 INSP01308 110 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
LIG4-202ENST00000405925 C8orf49Q96NF6 230 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 NACAE9PAV3 2078 aa7.07□□□□□ -1.28
LIG4-202ENST00000405925 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 EBI3Q14213 229 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 Q6YL49 198 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 RCHY1Q96PM5 261 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 PRR25Q96S07 402 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 C1QTNF4Q9BXJ3 329 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 CFAP54Q96N23 3096 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 PPP1R17O96001 155 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 VGLL1Q99990 258 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 TRAV12-2A0A075B6T6 113 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 TRGV1A0A0A0MS02 117 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 BUB3O43684 328 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 ADMP35318 185 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 PTTG1IPP53801 180 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 RIPPLY3P57055 190 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 TMEM75Q8N9X5 138 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 TRGV4A0A0C4DH28 118 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 NCR2O95944 276 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 CDX1P47902 265 aaPredicted RBP7.06□□□□□ -1.28
LIG4-202ENST00000405925 CACNG7P62955 275 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 TMEM86BQ8N661 226 aa7.06□□□□□ -1.28
LIG4-202ENST00000405925 CITED2Q99967 270 aaPredicted RBP7.06□□□□□ -1.28
LIG4-202ENST00000405925 EYSQ5T1H1 3165 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 COLCA2A8K830 154 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 ARMS2P0C7Q2 107 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 EVI2AP22794 236 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 HERVK_113P61574 105 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 ASPHD1Q5U4P2 390 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 AKAP13Q12802 2813 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 IGHV3-73A0A0B4J1V6 119 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 A0A1B0GUS0 222 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 CLPSL1A2RUU4 121 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 GP9P14770 177 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 OR10J3Q5JRS4 329 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 C11orf52Q96A22 123 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 HELZ2Q9BYK8 2649 aaKnown RBP7.05□□□□□ -1.28
LIG4-202ENST00000405925 CRYGBP07316 175 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 PLP1P60201 277 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 ZNF415Q09FC8 603 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 UNQ9165/PRO28630Q6UXU0 137 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 SCGB1D4Q6XE38 83 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 ATP5L2Q7Z4Y8 100 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 ZMAT5Q9UDW3 170 aaKnown RBP7.05□□□□□ -1.28
LIG4-202ENST00000405925 KLK9Q9UKQ9 250 aa7.05□□□□□ -1.28
LIG4-202ENST00000405925 TMEM262E9PQX1 116 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 IGHV3-53P01767 116 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 SMIM6P0DI80 62 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 OR9G4Q8NGQ1 327 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 GNB1LQ9BYB4 327 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 SERF1AO75920 110 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 LY6G6DO95868 133 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 PFN1P07737 140 aaKnown RBP7.04□□□□□ -1.28
LIG4-202ENST00000405925 C14orf178Q8N769 122 aaPredicted RBP7.04□□□□□ -1.28
LIG4-202ENST00000405925 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 RAI1Q7Z5J4 1906 aaPredicted RBP7.04□□□□□ -1.28
LIG4-202ENST00000405925 IGKV1D-37A0A075B6S9 117 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 IGF1P05019 195 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 CFAP46Q8IYW2 2715 aa7.04□□□□□ -1.28
LIG4-202ENST00000405925 HIST1H2BKO60814 126 aa7.03□□□□□ -1.28
LIG4-202ENST00000405925 IGHG4P01861 327 aa7.03□□□□□ -1.28
LIG4-202ENST00000405925 PPBPP02775 128 aa7.03□□□□□ -1.28
LIG4-202ENST00000405925 HIST1H2BJP06899 126 aa7.03□□□□□ -1.28
LIG4-202ENST00000405925 HIST1H2BOP23527 126 aa7.03□□□□□ -1.28
LIG4-202ENST00000405925 HIST1H2BBP33778 126 aa7.03□□□□□ -1.28
LIG4-202ENST00000405925 CDKN1BP46527 198 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms