RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 DOCK3Q8IZD9 2030 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 SPINK8P0C7L1 97 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 TRBV19A0A075B6N1 114 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 CRYGCP07315 174 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 C9orf153Q5TBE3 101 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 TEX36Q5VZQ5 186 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 ADAMTSL5Q6ZMM2 481 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
NRXN1-204ENST00000401669 RNF144BQ7Z419 303 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 Q8TCH9 128 aa12.85□□□□□ -0.35
NRXN1-204ENST00000401669 DOCK7Q96N67 2140 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 XCL1P47992 114 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 ZNF492Q9P255 531 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 RPL18AQ02543 176 aaKnown RBP12.84□□□□□ -0.35
NRXN1-204ENST00000401669 FAM104BQ5XKR9 115 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 Q6ZQT7 251 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 PTPRFP10586 1907 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 IGHG4P01861 327 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 LMO1P25800 156 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 HERVK_113P63121 156 aa12.84□□□□□ -0.35
NRXN1-204ENST00000401669 NDUFA4L2Q9NRX3 87 aa12.83□□□□□ -0.35
NRXN1-204ENST00000401669 IGHV7-4-1A0A0J9YVY3 117 aa12.83□□□□□ -0.36
NRXN1-204ENST00000401669 A0A1B0GUS0 222 aa12.83□□□□□ -0.36
NRXN1-204ENST00000401669 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.36
NRXN1-204ENST00000401669 TRAV13-2A0A0B4J235 113 aa12.83□□□□□ -0.36
NRXN1-204ENST00000401669 FER1L5A0AVI2 2057 aa12.83□□□□□ -0.36
NRXN1-204ENST00000401669 CCL18P55774 89 aa12.83□□□□□ -0.36
NRXN1-204ENST00000401669 Q6ZS49 121 aa12.83□□□□□ -0.36
NRXN1-204ENST00000401669 Q6ZRM9 215 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 CCL24O00175 119 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 ZNF833PQ6ZTB9 187 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 ZNF503Q96F45 646 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 CLPSL1A2RUU4 121 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 LOXP28300 417 aaPredicted RBP12.82□□□□□ -0.36
NRXN1-204ENST00000401669 C9orf66Q5T8R8 295 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 COLCA2A8K830 154 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 BUB3O43684 328 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 PIFOQ8TCI5 191 aa12.82□□□□□ -0.36
NRXN1-204ENST00000401669 TET1Q8NFU7 2136 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 LRRK1Q38SD2 2015 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 USF3Q68DE3 2245 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 ZNF134P52741 427 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 HEATR1Q9H583 2144 aaKnown RBP12.81□□□□□ -0.36
NRXN1-204ENST00000401669 ETDCA0A1B0GVM5 59 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 LOC285556D6RIA3 1793 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 TINCRA0A1B0GVN0 87 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 RNASE13Q5GAN3 156 aaKnown RBP12.81□□□□□ -0.36
NRXN1-204ENST00000401669 UTF1Q5T230 341 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 PLXNA1Q9UIW2 1896 aa12.81□□□□□ -0.36
NRXN1-204ENST00000401669 DEFB112Q30KQ8 113 aa12.8□□□□□ -0.36
NRXN1-204ENST00000401669 FAM120AOSQ5T036 256 aa12.8□□□□□ -0.36
NRXN1-204ENST00000401669 PRR25Q96S07 402 aa12.8□□□□□ -0.36
NRXN1-204ENST00000401669 TIMM17AQ99595 171 aa12.8□□□□□ -0.36
NRXN1-204ENST00000401669 VPREB3Q9UKI3 123 aa12.8□□□□□ -0.36
NRXN1-204ENST00000401669 FGF6P10767 208 aa12.8□□□□□ -0.36
NRXN1-204ENST00000401669 TIRAPP58753 221 aa12.8□□□□□ -0.36
NRXN1-204ENST00000401669 MRPL53Q96EL3 112 aaKnown RBP12.8□□□□□ -0.36
NRXN1-204ENST00000401669 TRBV20-1A0A075B6N2 111 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 FOXL2NBQ6ZUU3 175 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 ROS1P08922 2347 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 NOTCH3Q9UM47 2321 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 CHD5Q8TDI0 1954 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 FAM231BA6NCW3 169 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.79□□□□□ -0.36
NRXN1-204ENST00000401669 MRPL51Q4U2R6 128 aaKnown RBP12.79□□□□□ -0.36
NRXN1-204ENST00000401669 FREM3P0C091 2139 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 DUX4L9Q6RFH8 374 aaPredicted RBP12.79□□□□□ -0.36
NRXN1-204ENST00000401669 RIF1Q5UIP0 2472 aaKnown RBP12.79□□□□□ -0.36
NRXN1-204ENST00000401669 NBL1P41271 181 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 CRIPAKQ8N1N5 446 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 CFHR4Q92496 578 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 U3KQE9 123 aa12.79□□□□□ -0.36
NRXN1-204ENST00000401669 H3BRN7 92 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 PRSS57Q6UWY2 283 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 IGLV3-9A0A075B6K5 115 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 IGHV4-59P01825 116 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 FOXI2Q6ZQN5 318 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 ATRXP46100 2492 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 C4orf48Q5BLP8 95 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 WDR90Q96KV7 1748 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 LTBP1Q14766 1721 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 IGHV4-4A0A075B6R2 117 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 QRFPP83859 136 aa12.78□□□□□ -0.36
NRXN1-204ENST00000401669 CHKB-CPT1BH3BT56 60 aa12.77□□□□□ -0.36
NRXN1-204ENST00000401669 EGR2P11161 476 aaPredicted RBP12.77□□□□□ -0.36
NRXN1-204ENST00000401669 MPDZO75970 2070 aa12.77□□□□□ -0.36
NRXN1-204ENST00000401669 GP9P14770 177 aa12.77□□□□□ -0.37
NRXN1-204ENST00000401669 SRSF2Q01130 221 aaKnown RBP12.77□□□□□ -0.37
NRXN1-204ENST00000401669 BOD1L2Q8IYS8 172 aa12.77□□□□□ -0.37
NRXN1-204ENST00000401669 LOC105371267A0A1B0GV96 52 aa12.77□□□□□ -0.37
NRXN1-204ENST00000401669 SPTAN1Q13813 2472 aaKnown RBP12.77□□□□□ -0.37
NRXN1-204ENST00000401669 DOCK6Q96HP0 2047 aa12.77□□□□□ -0.37
NRXN1-204ENST00000401669 C17orf58Q2M2W7 97 aa12.76□□□□□ -0.37
NRXN1-204ENST00000401669 CAMK2N2Q96S95 79 aa12.76□□□□□ -0.37
NRXN1-204ENST00000401669 Q6ZR03 302 aa12.76□□□□□ -0.37
NRXN1-204ENST00000401669 DEFB136Q30KP8 78 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms