RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 KLF5Q13887 457 aaPredicted RBP19.71■□□□□ 0.75
SHARPIN-202ENST00000398712 KCNS1Q96KK3 526 aa19.71■□□□□ 0.75
SHARPIN-202ENST00000398712 SAMD10Q9BYL1 202 aa19.71■□□□□ 0.75
SHARPIN-202ENST00000398712 HECTD1Q9ULT8 2610 aa19.71■□□□□ 0.75
SHARPIN-202ENST00000398712 RPS20P60866 119 aaKnown RBP19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 C18orf32Q8TCD1 76 aa19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 BORCS7Q96B45 105 aa19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 ALKBH7Q9BT30 221 aaPredicted RBP19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 PEF1Q9UBV8 284 aaKnown RBP19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 ERCC8Q13216 396 aa19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 C16orf92Q96LL3 132 aa19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 PSMG3-AS1Q96PY0 264 aa19.7■□□□□ 0.74
SHARPIN-202ENST00000398712 CSPG4Q6UVK1 2322 aa19.69■□□□□ 0.74
SHARPIN-202ENST00000398712 SMAD7O15105 426 aaKnown RBP19.69■□□□□ 0.74
SHARPIN-202ENST00000398712 CENPEQ02224 2701 aa19.68■□□□□ 0.74
SHARPIN-202ENST00000398712 SRSF2Q01130 221 aaKnown RBP19.68■□□□□ 0.74
SHARPIN-202ENST00000398712 PRDM13Q9H4Q3 707 aa19.68■□□□□ 0.74
SHARPIN-202ENST00000398712 ARMS2P0C7Q2 107 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 TMEM78Q5T7P6 136 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 SIGLECL1Q8N7X8 197 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 RCHY1Q96PM5 261 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 ZFHX3Q15911 3703 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 POLQO75417 2590 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 IQCJQ1A5X6 159 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 FAM106AQ4KMX7 169 aa19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 DAZ1Q9NQZ3 744 aaKnown RBP19.67■□□□□ 0.74
SHARPIN-202ENST00000398712 MAP1AP78559 2803 aaPredicted RBP19.66■□□□□ 0.74
SHARPIN-202ENST00000398712 IGHV7-4-1A0A0J9YVY3 117 aa19.66■□□□□ 0.74
SHARPIN-202ENST00000398712 ZNF80P51504 273 aaPredicted RBP19.66■□□□□ 0.74
SHARPIN-202ENST00000398712 GATD1Q8NB37 220 aa19.66■□□□□ 0.74
SHARPIN-202ENST00000398712 FABP5P3A8MUU1 101 aa19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 HOXA3O43365 443 aaPredicted RBP19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 GPX1P07203 203 aa19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 ZNF138P52744 262 aa19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 C9orf47Q6ZRZ4 202 aa19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 AGPAT4-IT1Q9H0P7 198 aa19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 K7EMT4 169 aa19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 TPPP3Q9BW30 176 aa19.65■□□□□ 0.74
SHARPIN-202ENST00000398712 TMSB15BA0A087X1C1 80 aa19.64■□□□□ 0.73
SHARPIN-202ENST00000398712 LOC102724200A0A096LPH7 203 aaPredicted RBP19.64■□□□□ 0.73
SHARPIN-202ENST00000398712 GPHB5Q86YW7 130 aa19.64■□□□□ 0.73
SHARPIN-202ENST00000398712 ZNF702PQ9H963 129 aa19.64■□□□□ 0.73
SHARPIN-202ENST00000398712 PPP1R14DQ9NXH3 145 aa19.64■□□□□ 0.73
SHARPIN-202ENST00000398712 ZNF324O75467 553 aaPredicted RBP19.63■□□□□ 0.73
SHARPIN-202ENST00000398712 AMTP48728 403 aa19.63■□□□□ 0.73
SHARPIN-202ENST00000398712 IL17RELQ6ZVW7 336 aa19.63■□□□□ 0.73
SHARPIN-202ENST00000398712 TEX29Q8N6K0 151 aa19.63■□□□□ 0.73
SHARPIN-202ENST00000398712 CSMD2Q7Z408 3487 aa19.63■□□□□ 0.73
SHARPIN-202ENST00000398712 SCGB1D1O95968 90 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 LYZL1Q6UWQ5 148 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 Q6ZWC4 215 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 RHPN1-AS1Q9BWJ2 59 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 FLNBO75369 2602 aaKnown RBP19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 FOXE3Q13461 319 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 TM4SF20Q53R12 229 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 ZNF738Q8NE65 137 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 NRN1Q9NPD7 142 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 NAV2Q8IVL1 2488 aa19.62■□□□□ 0.73
SHARPIN-202ENST00000398712 NBPF19A0A087WUL8 3843 aa19.61■□□□□ 0.73
SHARPIN-202ENST00000398712 ELANEP08246 267 aa19.61■□□□□ 0.73
SHARPIN-202ENST00000398712 SMPXQ9UHP9 88 aa19.61■□□□□ 0.73
SHARPIN-202ENST00000398712 UFC1Q9Y3C8 167 aa19.61■□□□□ 0.73
SHARPIN-202ENST00000398712 SOCS3O14543 225 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 ORM1P02763 201 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 PMCHP20382 165 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 PKIAP61925 76 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 C10orf99Q6UWK7 81 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 NAGKQ9UJ70 344 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 LINC00587B1AMM8 73 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 RPL11P62913 178 aaKnown RBP19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 HIST1H1AQ02539 215 aaPredicted RBP19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 LINC01559Q495D7 138 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 FER1L6-AS1Q8NA97 138 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 C20orf173Q96LM9 149 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 LENEPQ9Y5L5 61 aa19.6■□□□□ 0.73
SHARPIN-202ENST00000398712 OVOL1O14753 267 aa19.59■□□□□ 0.73
SHARPIN-202ENST00000398712 RPLP1P05386 114 aaKnown RBP19.59■□□□□ 0.73
SHARPIN-202ENST00000398712 CTRLP40313 264 aa19.59■□□□□ 0.73
SHARPIN-202ENST00000398712 PRR31Q5SQ13 230 aa19.59■□□□□ 0.73
SHARPIN-202ENST00000398712 ZNF493Q6ZR52 646 aa19.59■□□□□ 0.73
SHARPIN-202ENST00000398712 TSTD3H0UI37 97 aa19.58■□□□□ 0.73
SHARPIN-202ENST00000398712 HSBP1O75506 76 aa19.57■□□□□ 0.72
SHARPIN-202ENST00000398712 IGLC6P0CF74 106 aa19.57■□□□□ 0.72
SHARPIN-202ENST00000398712 WFDC11Q8NEX6 87 aa19.57■□□□□ 0.72
SHARPIN-202ENST00000398712 RNASEKQ6P5S7 137 aaKnown RBP19.57■□□□□ 0.72
SHARPIN-202ENST00000398712 OR10J6PQ8NGY7 276 aa19.57■□□□□ 0.72
SHARPIN-202ENST00000398712 MYOZ3Q8TDC0 251 aa19.57■□□□□ 0.72
SHARPIN-202ENST00000398712 LINC00477Q96M19 166 aa19.57■□□□□ 0.72
SHARPIN-202ENST00000398712 ABCA12Q86UK0 2595 aa19.56■□□□□ 0.72
SHARPIN-202ENST00000398712 HIST2H2BCQ6DN03 193 aa19.56■□□□□ 0.72
SHARPIN-202ENST00000398712 LGALS1P09382 135 aaKnown RBP19.55■□□□□ 0.72
SHARPIN-202ENST00000398712 SAMD13Q5VXD3 122 aa19.55■□□□□ 0.72
SHARPIN-202ENST00000398712 NIT1Q86X76 327 aa19.55■□□□□ 0.72
SHARPIN-202ENST00000398712 NTF3P20783 257 aa19.55■□□□□ 0.72
SHARPIN-202ENST00000398712 Q8N2B8 174 aa19.55■□□□□ 0.72
SHARPIN-202ENST00000398712 DMRTA1Q5VZB9 504 aa19.54■□□□□ 0.72
SHARPIN-202ENST00000398712 FAM19A2Q8N3H0 131 aa19.54■□□□□ 0.72
SHARPIN-202ENST00000398712 RNF152Q8N8N0 203 aa19.54■□□□□ 0.72
SHARPIN-202ENST00000398712 CHCHD1Q96BP2 118 aaKnown RBP19.54■□□□□ 0.72
SHARPIN-202ENST00000398712 UBE2E2Q96LR5 201 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms