RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 DOCK11Q5JSL3 2073 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 MED13Q9UHV7 2174 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 ANAPC1Q9H1A4 1944 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 E9PQ18 207 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 TNFRSF6BO95407 300 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 GUSBP1Q15486 140 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 ADCYAP1P18509 176 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 TANC1Q9C0D5 1861 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 SHISA9B4DS77 424 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 C22orf46C9J442 243 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 SYS1-DBNDD2H3BUS1 97 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 DAD1P61803 113 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 CT83Q5H943 113 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 K7EM74 188 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 NDUFS7O75251 213 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 BCL6BQ8N143 479 aaPredicted RBP12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 VOPP1Q96AW1 172 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 ANAPC13Q9BS18 74 aa12.93□□□□□ -0.34
PCDHA12-201ENST00000398631 CSPG4Q6UVK1 2322 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 IGHV1OR15-1A0A075B7D0 117 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 Q71RC1 249 aaPredicted RBP12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 PRIMA1Q86XR5 153 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 PLCE1Q9P212 2302 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 ANKHD1Q8IWZ3 2542 aaKnown RBP12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 F5H768 121 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 IGHV2-5P01817 119 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 NPC2P61916 151 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 DIAPH2-AS1Q14236 149 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 POU2AF1Q16633 256 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 GATD1Q8NB37 220 aa12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 GRNP28799 593 aaKnown RBP12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 MCRIP2Q9BUT9 160 aaKnown RBP12.92□□□□□ -0.34
PCDHA12-201ENST00000398631 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
PCDHA12-201ENST00000398631 H3BRN7 92 aa12.91□□□□□ -0.34
PCDHA12-201ENST00000398631 SSBP2P81877 361 aaPredicted RBP12.91□□□□□ -0.34
PCDHA12-201ENST00000398631 TMEM14CQ9P0S9 112 aa12.91□□□□□ -0.34
PCDHA12-201ENST00000398631 CDKN1BP46527 198 aa12.91□□□□□ -0.34
PCDHA12-201ENST00000398631 TMEM213A2RRL7 107 aa12.91□□□□□ -0.34
PCDHA12-201ENST00000398631 KLK9Q9UKQ9 250 aa12.91□□□□□ -0.34
PCDHA12-201ENST00000398631 hDV102S1A0JD36 115 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 GAGE12JA6NER3 117 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 PRSS46E5RG02 174 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 IGHV2-70P01814 119 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 IGLC1P0CG04 106 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 GAGE1Q13065 139 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 GAGE4Q13068 117 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 GAGE5Q13069 117 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 PRR25Q96S07 402 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 C8orf49Q96NF6 230 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 Q0VG73 95 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 PLXNA2O75051 1894 aa12.9□□□□□ -0.34
PCDHA12-201ENST00000398631 ZNF664Q8N3J9 261 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 C8orf31Q8N9H6 132 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 SPXQ9BT56 116 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 CTSZQ9UBR2 303 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 UBE2V1Q13404 147 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 Q8NFD4 153 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 MYO18BQ8IUG5 2567 aa12.89□□□□□ -0.35
PCDHA12-201ENST00000398631 H3BUA1 57 aa12.88□□□□□ -0.35
PCDHA12-201ENST00000398631 APOC4P55056 127 aa12.88□□□□□ -0.35
PCDHA12-201ENST00000398631 MPV17L2Q567V2 206 aa12.88□□□□□ -0.35
PCDHA12-201ENST00000398631 RNF138Q8WVD3 245 aa12.88□□□□□ -0.35
PCDHA12-201ENST00000398631 CFHR3Q02985 330 aa12.88□□□□□ -0.35
PCDHA12-201ENST00000398631 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 AZU1P20160 251 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 FAM120AOSQ5T036 256 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 VPREB3Q9UKI3 123 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 TRBV25-1A0A075B6N4 114 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 C9JQL5 133 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 CD5LO43866 347 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 LURAP1LQ8IV03 231 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 THAP8Q8NA92 274 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 CYYR1Q96J86 154 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 IGHV3-16A0A0C4DH30 117 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 C2orf66Q6UXQ4 117 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 OTOGLQ3ZCN5 2332 aa12.87□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 LEPROTO15243 131 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE7O76087 117 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 HAPLN4Q86UW8 402 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 C11orf53Q8IXP5 236 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 ANXA2RQ3ZCQ2 193 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 TECTAO75443 2155 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 FAM231DQ6ZW35 169 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 DKK4Q9UBT3 224 aa12.86□□□□□ -0.35
PCDHA12-201ENST00000398631 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
PCDHA12-201ENST00000398631 DLX4Q92988 240 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms