RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 C14orf178Q8N769 122 aaPredicted RBP12.1□□□□□ -0.47
LSS-202ENST00000397728 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 GCSHP23434 173 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 MALP21145 153 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 LINC01551Q86U37 167 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 VCX2Q9H322 139 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 H3BRN7 92 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 CD5LO43866 347 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 ATP5LO75964 103 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 PPBPP02775 128 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 ZNF124Q15973 351 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 A0A087WWL8 130 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 Q86TA4 180 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 C5orf52A6NGY3 159 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
LSS-202ENST00000397728 DNLZQ5SXM8 178 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 BBC3Q96PG8 261 aaPredicted RBP12.09□□□□□ -0.47
LSS-202ENST00000397728 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
LSS-202ENST00000397728 A0A087WWC5 75 aa12.08□□□□□ -0.47
LSS-202ENST00000397728 NCR2O95944 276 aa12.08□□□□□ -0.47
LSS-202ENST00000397728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.08□□□□□ -0.48
LSS-202ENST00000397728 ARMS2P0C7Q2 107 aa12.08□□□□□ -0.48
LSS-202ENST00000397728 ST6GALNAC6Q969X2 333 aa12.08□□□□□ -0.48
LSS-202ENST00000397728 CDKN1BP46527 198 aa12.08□□□□□ -0.48
LSS-202ENST00000397728 FOXC2Q99958 501 aa12.08□□□□□ -0.48
LSS-202ENST00000397728 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
LSS-202ENST00000397728 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
LSS-202ENST00000397728 ARHGAP21Q5T5U3 1957 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 ATOH7Q8N100 152 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 GP9P14770 177 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 CFAP161Q6P656 301 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 COL5A1P20908 1838 aaPredicted RBP12.07□□□□□ -0.48
LSS-202ENST00000397728 C2CD3Q4AC94 2353 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 LINC00587B1AMM8 73 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 UBE2CO00762 179 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 IGHG2P01859 326 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 HOXA5P20719 270 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 FAM19A2Q8N3H0 131 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 CYSLTR1Q9Y271 337 aa12.07□□□□□ -0.48
LSS-202ENST00000397728 H7C2G1 150 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 SLC25A2Q9BXI2 301 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 NUP210LQ5VU65 1888 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 A0A087WW49 117 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 KRTAP10-9P60411 292 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 ATRAIDQ6UW56 229 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 OR11H2Q8NH07 326 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 IGLV11-55A0A075B6I3 123 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 GAGE12BA1L429 117 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 F6UB75 175 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 K7EIM0 57 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 GAGE7O76087 117 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 LY6G6DO95868 133 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 A6NDX4 124 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 H3BRM9 83 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 LY6G5BQ8NDX9 201 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 DPH3P1Q9H4G8 78 aa12.06□□□□□ -0.48
LSS-202ENST00000397728 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.483e-9■■■□□ 15.6
LSS-202ENST00000397728 MRPL52Q86TS9 123 aaKnown RBP12.05□□□□□ -0.48
LSS-202ENST00000397728 ODF3L1Q8IXM7 274 aa12.05□□□□□ -0.48
LSS-202ENST00000397728 TMEM86BQ8N661 226 aa12.05□□□□□ -0.48
LSS-202ENST00000397728 MRAP2Q96G30 205 aa12.05□□□□□ -0.48
LSS-202ENST00000397728 PMCHL2Q9BQD1 86 aa12.05□□□□□ -0.48
LSS-202ENST00000397728 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
LSS-202ENST00000397728 CD28P10747 220 aa12.05□□□□□ -0.48
LSS-202ENST00000397728 NXT2Q9NPJ8 142 aaKnown RBP12.05□□□□□ -0.48
LSS-202ENST00000397728 RANBP2P49792 3224 aaKnown RBP12.04□□□□□ -0.48
LSS-202ENST00000397728 IGHV1OR15-1A0A075B7D0 117 aa12.04□□□□□ -0.48
LSS-202ENST00000397728 A0A1B0GV72 72 aa12.04□□□□□ -0.48
LSS-202ENST00000397728 PHLDA1Q8WV24 401 aaPredicted RBP12.04□□□□□ -0.48
LSS-202ENST00000397728 RAB37Q96AX2 223 aa12.04□□□□□ -0.48
LSS-202ENST00000397728 RPL24P83731 157 aaKnown RBP12.04□□□□□ -0.48
LSS-202ENST00000397728 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
LSS-202ENST00000397728 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
LSS-202ENST00000397728 PSCAO43653 123 aa12.04□□□□□ -0.48
LSS-202ENST00000397728 PFN1P07737 140 aaKnown RBP12.04□□□□□ -0.48
LSS-202ENST00000397728 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 C8orf49Q96NF6 230 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 SPAG8Q99932 426 aaPredicted RBP12.03□□□□□ -0.48
LSS-202ENST00000397728 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 CTSGP08311 255 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 I3L2K1 104 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 HLA-DMBP28068 263 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 ORMDL2Q53FV1 153 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 IGKV1-17P01599 117 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 TMEM14CQ9P0S9 112 aa12.03□□□□□ -0.48
LSS-202ENST00000397728 PLXNB1O43157 2135 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms