RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ZNF705GA8MUZ8 300 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-207ENST00000397411 HTN1P15515 57 aa18.28■□□□□ 0.52
TSPAN4-207ENST00000397411 C9orf47Q6ZRZ4 202 aa18.28■□□□□ 0.52
TSPAN4-207ENST00000397411 VGLL1Q99990 258 aa18.28■□□□□ 0.52
TSPAN4-207ENST00000397411 TMEM167BQ9NRX6 74 aa18.28■□□□□ 0.52
TSPAN4-207ENST00000397411 NUPR2A6NF83 97 aa18.26■□□□□ 0.51
TSPAN4-207ENST00000397411 C20orf144Q9BQM9 153 aa18.26■□□□□ 0.51
TSPAN4-207ENST00000397411 DIRC3C9JPN6 131 aa18.25■□□□□ 0.51
TSPAN4-207ENST00000397411 C1QBP02746 253 aa18.25■□□□□ 0.51
TSPAN4-207ENST00000397411 SEC11BP0C7V7 166 aa18.25■□□□□ 0.51
TSPAN4-207ENST00000397411 KIR3DS1Q14943 382 aa18.25■□□□□ 0.51
TSPAN4-207ENST00000397411 PHLDA1Q8WV24 401 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-207ENST00000397411 KLK5Q9Y337 293 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-207ENST00000397411 TRAV12-3A0A0B4J271 114 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 RBAKDNA6NC62 111 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 SLC25A5P05141 298 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 GPX1P07203 203 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 SPART-AS1P0CW21 52 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 ZNF138P52744 262 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 GFI1BQ5VTD9 330 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 CEMP1Q6PRD7 247 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 SSX7Q7RTT5 188 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 NIPSNAP3BQ9BS92 247 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 ZNF492Q9P255 531 aa18.24■□□□□ 0.51
TSPAN4-207ENST00000397411 H7BYZ3 331 aa18.23■□□□□ 0.51
TSPAN4-207ENST00000397411 TPT1P13693 172 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-207ENST00000397411 RNASE4P34096 147 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-207ENST00000397411 TAS2R60P59551 318 aa18.23■□□□□ 0.51
TSPAN4-207ENST00000397411 ZNF726P1Q15940 193 aa18.23■□□□□ 0.51
TSPAN4-207ENST00000397411 STOML3Q8TAV4 291 aa18.23■□□□□ 0.51
TSPAN4-207ENST00000397411 PRM2P04554 102 aa18.22■□□□□ 0.51
TSPAN4-207ENST00000397411 FGF8P55075 233 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-207ENST00000397411 LGALSLQ3ZCW2 172 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-207ENST00000397411 CCDC28AQ8IWP9 274 aa18.22■□□□□ 0.51
TSPAN4-207ENST00000397411 DNAH7Q8WXX0 4024 aa18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 C7orf71A4D174 169 aa18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 UMAD1C9J7I0 102 aa18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 GOLT1AQ6ZVE7 132 aa18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 ARL6IP6Q8N6S5 226 aa18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 SUN5Q8TC36 379 aa18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 CELA1Q9UNI1 258 aa18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 YTHDF2Q9Y5A9 579 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-207ENST00000397411 TEX48A0A1B0GUV7 120 aa18.2■□□□□ 0.5
TSPAN4-207ENST00000397411 MAP1LC3B2A6NCE7 125 aa18.2■□□□□ 0.5
TSPAN4-207ENST00000397411 SUMO1P63165 101 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-207ENST00000397411 ZNF767PQ75MW2 155 aa18.2■□□□□ 0.5
TSPAN4-207ENST00000397411 Q8TAT8 98 aa18.2■□□□□ 0.5
TSPAN4-207ENST00000397411 MAP1LC3BQ9GZQ8 125 aa18.2■□□□□ 0.5
TSPAN4-207ENST00000397411 TMPRSS5Q9H3S3 457 aa18.2■□□□□ 0.5
TSPAN4-207ENST00000397411 NMBP08949 121 aa18.19■□□□□ 0.5
TSPAN4-207ENST00000397411 AZU1P20160 251 aa18.19■□□□□ 0.5
TSPAN4-207ENST00000397411 GNG5P63218 68 aa18.19■□□□□ 0.5
TSPAN4-207ENST00000397411 FAM222AQ5U5X8 452 aa18.19■□□□□ 0.5
TSPAN4-207ENST00000397411 C5orf17Q8NAS9 161 aa18.19■□□□□ 0.5
TSPAN4-207ENST00000397411 FAM213BQ8TBF2 198 aa18.19■□□□□ 0.5
TSPAN4-207ENST00000397411 FAM19A4Q96LR4 140 aa18.19■□□□□ 0.5
TSPAN4-207ENST00000397411 C11orf94C9JXX5 98 aa18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 K7EQM0 130 aa18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 CRISP2P16562 243 aa18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 CD300CQ08708 224 aa18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 BTN1A1Q13410 526 aa18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 C12orf74Q32Q52 190 aa18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 EIF5AL1Q6IS14 154 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 TMED6Q8WW62 240 aa18.18■□□□□ 0.5
TSPAN4-207ENST00000397411 A0A1B0GVG6 124 aa18.17■□□□□ 0.5
TSPAN4-207ENST00000397411 KLLNB2CW77 178 aa18.17■□□□□ 0.5
TSPAN4-207ENST00000397411 UBE2G2P60604 165 aa18.17■□□□□ 0.5
TSPAN4-207ENST00000397411 ZFP69Q49AA0 526 aa18.17■□□□□ 0.5
TSPAN4-207ENST00000397411 Q6ZTC4 211 aa18.17■□□□□ 0.5
TSPAN4-207ENST00000397411 C16orf74Q96GX8 76 aa18.17■□□□□ 0.5
TSPAN4-207ENST00000397411 DKK2Q9UBU2 259 aa18.17■□□□□ 0.5
TSPAN4-207ENST00000397411 TRAV10A0A0B4J240 114 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 TRBV7-9A0A0J9YWB2 115 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 A0A1W2PRE2 83 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 IFNA7P01567 189 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 FHITP49789 147 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 DPPA3Q6W0C5 159 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 ZNF493Q6ZR52 646 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 SFT2D1Q8WV19 159 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 PYGO2Q9BRQ0 406 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 LENEPQ9Y5L5 61 aa18.16■□□□□ 0.5
TSPAN4-207ENST00000397411 SERTM2A0A1B0GWG4 89 aa18.15■□□□□ 0.5
TSPAN4-207ENST00000397411 ZFAND2AQ8N6M9 145 aa18.15■□□□□ 0.5
TSPAN4-207ENST00000397411 C2CD4CQ8TF44 421 aa18.15■□□□□ 0.5
TSPAN4-207ENST00000397411 PLA2G2EQ9NZK7 142 aa18.15■□□□□ 0.5
TSPAN4-207ENST00000397411 EPDR1Q9UM22 224 aa18.15■□□□□ 0.5
TSPAN4-207ENST00000397411 DAD1P61803 113 aa18.14■□□□□ 0.49
TSPAN4-207ENST00000397411 TMEM263Q8WUH6 116 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-207ENST00000397411 NKX6-2Q9C056 277 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-207ENST00000397411 RGS13O14921 159 aa18.13■□□□□ 0.49
TSPAN4-207ENST00000397411 TCRAP04437 139 aa18.13■□□□□ 0.49
TSPAN4-207ENST00000397411 SLC51BQ86UW2 128 aa18.13■□□□□ 0.49
TSPAN4-207ENST00000397411 NDFIP1Q9BT67 221 aa18.13■□□□□ 0.49
TSPAN4-207ENST00000397411 DEFB131BA0A096LNP1 70 aa18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 A0A1B0GV50 99 aa18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 LYRM9A8MSI8 78 aa18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 GGTLC3B5MD39 225 aa18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 ZNF324O75467 553 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 H2AFB1P0C5Y9 115 aa18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 MBD3L1Q8WWY6 194 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms