RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 SCGB2A2Q13296 93 aa11.53□□□□□ -0.56
CCNF-202ENST00000397066 C5orf64Q2M2E5 130 aa11.53□□□□□ -0.56
CCNF-202ENST00000397066 HIF1ANQ9NWT6 349 aa11.53□□□□□ -0.56
CCNF-202ENST00000397066 NBASA2RRP1 2371 aa11.53□□□□□ -0.56
CCNF-202ENST00000397066 MGAQ8IWI9 3026 aa11.53□□□□□ -0.56
CCNF-202ENST00000397066 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.56
CCNF-202ENST00000397066 TMEM158Q8WZ71 300 aa11.52□□□□□ -0.56
CCNF-202ENST00000397066 K7ERJ3 54 aa11.52□□□□□ -0.57
CCNF-202ENST00000397066 NXT2Q9NPJ8 142 aaKnown RBP11.52□□□□□ -0.57
CCNF-202ENST00000397066 GATA1P15976 413 aaPredicted RBP11.52□□□□□ -0.57
CCNF-202ENST00000397066 ZNF80P51504 273 aaPredicted RBP11.52□□□□□ -0.57
CCNF-202ENST00000397066 ECSCRQ19T08 205 aa11.52□□□□□ -0.57
CCNF-202ENST00000397066 ZC2HC1BQ5TFG8 222 aa11.52□□□□□ -0.57
CCNF-202ENST00000397066 CHAC1Q9BUX1 264 aa11.52□□□□□ -0.57
CCNF-202ENST00000397066 IGHV3-49A0A0A0MS15 119 aa11.52□□□□□ -0.57
CCNF-202ENST00000397066 GATD1Q8NB37 220 aa11.52□□□□□ -0.57
CCNF-202ENST00000397066 U3KQK5 164 aa11.52□□□□□ -0.57
CCNF-202ENST00000397066 J3KRW8 73 aa11.51□□□□□ -0.57
CCNF-202ENST00000397066 DPM2O94777 84 aa11.51□□□□□ -0.57
CCNF-202ENST00000397066 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
CCNF-202ENST00000397066 SPANXN1Q5VSR9 72 aa11.5□□□□□ -0.57
CCNF-202ENST00000397066 ADAMTSL5Q6ZMM2 481 aa11.5□□□□□ -0.57
CCNF-202ENST00000397066 K7EMI3 77 aa11.5□□□□□ -0.57
CCNF-202ENST00000397066 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
CCNF-202ENST00000397066 FXYD2P54710 66 aa11.5□□□□□ -0.57
CCNF-202ENST00000397066 PIP4P2Q8N4L2 257 aa11.5□□□□□ -0.57
CCNF-202ENST00000397066 KLK15Q9H2R5 256 aa11.5□□□□□ -0.57
CCNF-202ENST00000397066 UFSP1Q6NVU6 142 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 HIST1H4GQ99525 98 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 SPTBN1Q01082 2364 aaKnown RBP11.49□□□□□ -0.57
CCNF-202ENST00000397066 CFAP47Q6ZTR5 3102 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 MRPS12O15235 138 aaKnown RBP11.49□□□□□ -0.57
CCNF-202ENST00000397066 TRAV40A0A0B4J280 105 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 TMEM8BA6NDV4 472 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 G3V4G9 280 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 NDUFA3O95167 84 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
CCNF-202ENST00000397066 ZFHX2Q9C0A1 2572 aaPredicted RBP11.48□□□□□ -0.57
CCNF-202ENST00000397066 J3QR89 54 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
CCNF-202ENST00000397066 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 SMIM17P0DL12 118 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 IGKV2D-26A0A0A0MRZ7 120 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 ATP5LO75964 103 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 GOSR1O95249 250 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 CCDC144NLQ6NUI1 221 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 IGLV11-55A0A075B6I3 123 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 TMEM238C9JI98 176 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 PRR30Q53SZ7 412 aaPredicted RBP11.48□□□□□ -0.57
CCNF-202ENST00000397066 ZNF562Q6V9R5 426 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 DYNAPQ8N1N2 210 aa11.48□□□□□ -0.57
CCNF-202ENST00000397066 OVOL3O00110 214 aa11.47□□□□□ -0.57
CCNF-202ENST00000397066 DTX2Q86UW9 622 aa11.47□□□□□ -0.57
CCNF-202ENST00000397066 ARHGAP32A7KAX9 2087 aa11.47□□□□□ -0.57
CCNF-202ENST00000397066 TRAV26-2A0A0B4J265 109 aa11.47□□□□□ -0.57
CCNF-202ENST00000397066 ODF1Q14990 250 aa11.47□□□□□ -0.57
CCNF-202ENST00000397066 PSMG4Q5JS54 123 aa11.46□□□□□ -0.57
CCNF-202ENST00000397066 TRBV25-1A0A075B6N4 114 aa11.46□□□□□ -0.58
CCNF-202ENST00000397066 CLEC3BP05452 202 aa11.46□□□□□ -0.58
CCNF-202ENST00000397066 PRAC2D3DTV9 90 aa11.46□□□□□ -0.58
CCNF-202ENST00000397066 IGLC6P0CF74 106 aa11.46□□□□□ -0.58
CCNF-202ENST00000397066 SAMD13Q5VXD3 122 aa11.46□□□□□ -0.58
CCNF-202ENST00000397066 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.58
CCNF-202ENST00000397066 SMPXQ9UHP9 88 aa11.46□□□□□ -0.58
CCNF-202ENST00000397066 C15orf32Q32M92 178 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 TTC9CQ8N5M4 171 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 ANKHD1Q8IWZ3 2542 aaKnown RBP11.45□□□□□ -0.58
CCNF-202ENST00000397066 LY6LH3BQJ8 138 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 CTSGP08311 255 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 NDPQ00604 133 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 ZNF479Q96JC4 524 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 S100A4P26447 101 aaKnown RBP11.45□□□□□ -0.58
CCNF-202ENST00000397066 LAGE3Q14657 143 aa11.45□□□□□ -0.58
CCNF-202ENST00000397066 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 Q8N8P6 123 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 CFHR4Q92496 578 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 GTSF1LQ9H1H1 148 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 ANKRD11Q6UB99 2663 aaPredicted RBP11.44□□□□□ -0.58
CCNF-202ENST00000397066 NPBQ8NG41 125 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 RNF185Q96GF1 192 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 DCHS1Q96JQ0 3298 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 ADGRG4Q8IZF6 3080 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 CUL9Q8IWT3 2517 aa11.44□□□□□ -0.58
CCNF-202ENST00000397066 CEND1Q8N111 149 aa11.43□□□□□ -0.58
CCNF-202ENST00000397066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
CCNF-202ENST00000397066 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
CCNF-202ENST00000397066 VMO1Q7Z5L0 202 aa11.43□□□□□ -0.58
CCNF-202ENST00000397066 SMAD5-AS1Q9Y6J3 95 aa11.43□□□□□ -0.58
CCNF-202ENST00000397066 TRGV3P03979 118 aa11.43□□□□□ -0.58
CCNF-202ENST00000397066 MTURNQ8N3F0 131 aa11.43□□□□□ -0.58
CCNF-202ENST00000397066 SMG1Q96Q15 3661 aaKnown RBP11.42□□□□□ -0.58
CCNF-202ENST00000397066 EFNA4P52798 201 aa11.42□□□□□ -0.58
CCNF-202ENST00000397066 RPL11P62913 178 aaKnown RBP11.42□□□□□ -0.58
CCNF-202ENST00000397066 OR11H12B2RN74 326 aa11.42□□□□□ -0.58
CCNF-202ENST00000397066 SRSF1Q07955 248 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCNF-202ENST00000397066 OR11H1Q8NG94 326 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms