RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 B4DSR2 109 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 SUMO2P61956 95 aaKnown RBP11.74□□□□□ -0.53
CYTH3-202ENST00000396741 SNHG12Q9BXW3 62 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 KAAG1Q9UBP8 84 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 POLQO75417 2590 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 NBL1P41271 181 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 DSCAML1Q8TD84 2053 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 RASL11AQ6T310 242 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 MRPL16Q9NX20 251 aaKnown RBP11.74□□□□□ -0.53
CYTH3-202ENST00000396741 KIAA1549Q9HCM3 1950 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 NUP210LQ5VU65 1888 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 SRSF1Q07955 248 aaKnown RBP eCLIP11.74□□□□□ -0.53
CYTH3-202ENST00000396741 C19orf54Q5BKX5 351 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 ZNF295-AS1Q8N0V1 137 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 SPCS1Q9Y6A9 102 aa11.74□□□□□ -0.53
CYTH3-202ENST00000396741 NCKAP5O14513 1909 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 UBE2E1P51965 193 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 C11orf1Q9H5F2 150 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
CYTH3-202ENST00000396741 HCFC1P51610 2035 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 LYPD1Q8N2G4 141 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 ZC2HC1AQ96GY0 325 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 ST20Q9HBF5 79 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 YAE1D1Q9NRH1 226 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 DOPEY1Q5JWR5 2465 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 CFAP54Q96N23 3096 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 UBE2L6O14933 153 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 SPRY2O43597 315 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 DPM2O94777 84 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 PATE2Q6UY27 113 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 IL17RELQ6ZVW7 336 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 MTORP42345 2549 aa11.73□□□□□ -0.53
CYTH3-202ENST00000396741 ZNF418Q8TF45 676 aaPredicted RBP11.72□□□□□ -0.53
CYTH3-202ENST00000396741 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 A0A087WWL8 130 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 A0A0U1RRA0 63 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 VGLL1Q99990 258 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
CYTH3-202ENST00000396741 SIGMAR1Q99720 223 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 SYNJ2BPP57105 145 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 MEIG1Q5JSS6 88 aa11.72□□□□□ -0.53
CYTH3-202ENST00000396741 FN1P02751 2386 aaKnown RBP11.72□□□□□ -0.53
CYTH3-202ENST00000396741 TRIOO75962 3097 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 RNF223E7ERA6 249 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 PF4P02776 101 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 PAX1P15863 534 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 MEGF9Q9H1U4 602 aa11.71□□□□□ -0.53
CYTH3-202ENST00000396741 OVOL1O14753 267 aa11.71□□□□□ -0.54
CYTH3-202ENST00000396741 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.54
CYTH3-202ENST00000396741 PRSS57Q6UWY2 283 aa11.71□□□□□ -0.54
CYTH3-202ENST00000396741 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.54
CYTH3-202ENST00000396741 IGKCP01834 107 aa11.7□□□□□ -0.54
CYTH3-202ENST00000396741 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
CYTH3-202ENST00000396741 PKD1L2Q7Z442 2459 aa11.7□□□□□ -0.54
CYTH3-202ENST00000396741 PRR25Q96S07 402 aa11.7□□□□□ -0.54
CYTH3-202ENST00000396741 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
CYTH3-202ENST00000396741 IGKV1-17P01599 117 aa11.7□□□□□ -0.54
CYTH3-202ENST00000396741 TDRG1Q3Y452 100 aa11.7□□□□□ -0.54
CYTH3-202ENST00000396741 IGHV2-70DA0A0C4DH43 119 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 PPP1R17O96001 155 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 PDE6HQ13956 83 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 SMIM27A0A1W2PRY6 76 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 TMEM8BA6NDV4 472 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
CYTH3-202ENST00000396741 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
CYTH3-202ENST00000396741 TRGV2A0A075B6R0 118 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 H7C1H1 209 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 LAGE3Q14657 143 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 VCX2Q9H322 139 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 MSMBP08118 114 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 Q8NA96 180 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 FAM110DQ8TAY7 271 aaPredicted RBP11.68□□□□□ -0.54
CYTH3-202ENST00000396741 ORAOV1Q8WV07 137 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 TMEM262E9PQX1 116 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 H3BRN7 92 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 CKS1BP61024 79 aa11.68□□□□□ -0.54
CYTH3-202ENST00000396741 SRSF8Q9BRL6 282 aaKnown RBP11.68□□□□□ -0.54
CYTH3-202ENST00000396741 IGHV1-69DA0A0B4J2H0 117 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 A0A1B0GWB2 263 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 TNFRSF6BO95407 300 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 IGHV1-69P01742 117 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 IGLL1P15814 213 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 PAPPA-AS1Q5QFB9 102 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 FAM231DQ6ZW35 169 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 CHTOPQ9Y3Y2 248 aaKnown RBP11.67□□□□□ -0.54
CYTH3-202ENST00000396741 DSCAMO60469 2012 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 ZNF815PA8K554 130 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 TDGF1P3P51864 188 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
CYTH3-202ENST00000396741 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms