RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 IGHV3-38A0A0C4DH36 116 aa5.58□□□□□ -1.52
SCFD1-202ENST00000396629 ERCC8Q13216 396 aa5.58□□□□□ -1.52
SCFD1-202ENST00000396629 WFDC2Q14508 124 aa5.58□□□□□ -1.52
SCFD1-202ENST00000396629 MORN5Q5VZ52 161 aa5.58□□□□□ -1.52
SCFD1-202ENST00000396629 OR10G4Q8NGN3 311 aa5.58□□□□□ -1.52
SCFD1-202ENST00000396629 MRPL53Q96EL3 112 aaKnown RBP5.58□□□□□ -1.52
SCFD1-202ENST00000396629 LINC00477Q96M19 166 aa5.58□□□□□ -1.52
SCFD1-202ENST00000396629 RABL2BQ9UNT1 228 aa5.58□□□□□ -1.52
SCFD1-202ENST00000396629 OR4E1P0C645 316 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 CRISP2P16562 243 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 RNASE4P34096 147 aaKnown RBP5.57□□□□□ -1.52
SCFD1-202ENST00000396629 ASAH1Q13510 395 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 OPCMLQ14982 345 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 GUK1Q16774 197 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 BLNKQ8WV28 456 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 TMEM37Q8WXS4 190 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 ZNF479Q96JC4 524 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 IGHV1OR15-1A0A075B7D0 117 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 ZNF253O75346 499 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 CCNKO75909 580 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 NMBP08949 121 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 SFTA3P0C7M3 94 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 RRAS2P62070 204 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-202ENST00000396629 ID3Q02535 119 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 SLC38A11Q08AI6 406 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 TDRG1Q3Y452 100 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 TMEM128Q5BJH2 165 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 SH2D6Q7Z4S9 175 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 AGPAT4-IT1Q9H0P7 198 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 Q9HAA7 133 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 PSENENQ9NZ42 101 aa5.57□□□□□ -1.52
SCFD1-202ENST00000396629 C9JCJ5 164 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 GOSR2O14653 212 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 RGS13O14921 159 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 ATP6V1G2O95670 118 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 POLR2GP62487 172 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCFD1-202ENST00000396629 ZNF546Q86UE3 836 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 ZFAND2AQ8N6M9 145 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 CHAC1Q9BUX1 264 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 TM2D2Q9BX73 214 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 RABL2AQ9UBK7 228 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-202ENST00000396629 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
SCFD1-202ENST00000396629 CTDSP2O14595 271 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 AGPAT2O15120 278 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 COX7A2P2O60397 106 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 GPX1P07203 203 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 HOXB5P09067 269 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 CTF1Q16619 201 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 PRR9Q5T870 116 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 C10orf113Q5VZT2 155 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 TMEM14EPQ6UXP3 125 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 Q6ZQT7 251 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 C9orf47Q6ZRZ4 202 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 RASL10AQ92737 203 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 SMIM8Q96KF7 97 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 ARPC5LQ9BPX5 153 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 SLC25A31Q9H0C2 315 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 MCUBQ9NWR8 336 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 CCDC59Q9P031 241 aaKnown RBP5.55□□□□□ -1.52
SCFD1-202ENST00000396629 PRELID1Q9Y255 219 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 LOC100131303A0A0U1RQF7 123 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 M0R3E3 92 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 SFT2D2O95562 160 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 IGLV2-8P01709 118 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 LAGE3Q14657 143 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 OR10P1Q8NGE3 313 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 CIRBP-AS1Q8TBR5 109 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 NAA50Q9GZZ1 169 aaKnown RBP5.55□□□□□ -1.52
SCFD1-202ENST00000396629 MGAT4CQ9UBM8 478 aa5.55□□□□□ -1.52
SCFD1-202ENST00000396629 TRBV19A0A075B6N1 114 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 TRAV8-6A0A0B4J262 113 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 RS1O15537 224 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 RGS5O15539 181 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 METTL15P1P0C7V9 234 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 TNFSF8P32971 234 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 IL18Q14116 193 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 ZNF846Q147U1 533 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 MGST2Q99735 147 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 SPXQ9BT56 116 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 DNAJC4Q9NNZ3 241 aa5.54□□□□□ -1.52
SCFD1-202ENST00000396629 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-202ENST00000396629 TRAV4A0A0B4J268 109 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 NDUFB4O95168 129 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 PPT1P50897 306 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 LINC01620Q4KN68 170 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 TNXBP22105 4242 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 SSSCA1O60232 199 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 IGHV3-30P01768 117 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 IGHV3-33P01772 117 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 IGHV3-30-5P0DP03 117 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
SCFD1-202ENST00000396629 ARL16Q0P5N6 197 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 PPP1R1AQ13522 171 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 ACOT6Q3I5F7 207 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-202ENST00000396629 DIRAS2Q96HU8 199 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 GGACTQ9BVM4 153 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 SRRQ9GZT4 340 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 ZNF492Q9P255 531 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms