RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 CDC34P49427 236 aaPredicted RBP11.54□□□□□ -0.56
CLTA-203ENST00000396603 UBE2L3P68036 154 aaKnown RBP11.54□□□□□ -0.56
CLTA-203ENST00000396603 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
CLTA-203ENST00000396603 F6UB75 175 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 INSP01308 110 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 PYYP10082 97 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 RAB2AP61019 212 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 FAM122CQ6P4D5 195 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 TMEM88Q6PEY1 159 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 RNF141Q8WVD5 230 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
CLTA-203ENST00000396603 SAT2Q96F10 170 aaPredicted RBP11.53□□□□□ -0.56
CLTA-203ENST00000396603 C20orf173Q96LM9 149 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 ZNF471Q9BX82 626 aaPredicted RBP11.53□□□□□ -0.56
CLTA-203ENST00000396603 ACTR3CQ9C0K3 210 aaPredicted RBP11.53□□□□□ -0.56
CLTA-203ENST00000396603 SH3BGRL3Q9H299 93 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 ZNF586Q9NXT0 402 aa11.53□□□□□ -0.56
CLTA-203ENST00000396603 C1orf134Q5TEV5 83 aa11.52□□□□□ -0.57
CLTA-203ENST00000396603 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.57
CLTA-203ENST00000396603 BLNKQ8WV28 456 aa11.52□□□□□ -0.57
CLTA-203ENST00000396603 RPUSD4Q96CM3 377 aaKnown RBP11.52□□□□□ -0.57
CLTA-203ENST00000396603 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.57
CLTA-203ENST00000396603 TPT1P13693 172 aaKnown RBP11.51□□□□□ -0.57
CLTA-203ENST00000396603 CNN1P51911 297 aaKnown RBP11.51□□□□□ -0.57
CLTA-203ENST00000396603 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
CLTA-203ENST00000396603 TMUB2Q71RG4 321 aa11.51□□□□□ -0.57
CLTA-203ENST00000396603 OR10J6PQ8NGY7 276 aa11.51□□□□□ -0.57
CLTA-203ENST00000396603 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
CLTA-203ENST00000396603 PPP1R14DQ9NXH3 145 aa11.51□□□□□ -0.57
CLTA-203ENST00000396603 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 H3BTX0 84 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 SLC17A3O00476 420 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
CLTA-203ENST00000396603 SNRPCP09234 159 aaKnown RBP11.5□□□□□ -0.57
CLTA-203ENST00000396603 OR10J4P0C629 311 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 HTN3P15516 51 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 HIST1H1AQ02539 215 aaPredicted RBP11.5□□□□□ -0.57
CLTA-203ENST00000396603 ZFP69Q49AA0 526 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 FAM74A1Q5RGS3 127 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 TMEM256Q8N2U0 113 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 OR8A1Q8NGG7 326 aa11.5□□□□□ -0.57
CLTA-203ENST00000396603 UMAD1C9J7I0 102 aa11.49□□□□□ -0.57
CLTA-203ENST00000396603 CXorf1O96002 111 aa11.49□□□□□ -0.57
CLTA-203ENST00000396603 CSN1S1P47710 185 aa11.49□□□□□ -0.57
CLTA-203ENST00000396603 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
CLTA-203ENST00000396603 CTXND1A0A1B0GTU2 59 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 BOLA2-SMG1P6H3BVE0 249 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 NDUFB4O95168 129 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 STAG3L2P0CL84 134 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 STAG3L3P0CL85 134 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 BAP18Q8IXM2 172 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 STOML3Q8TAV4 291 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 TMEM167BQ9NRX6 74 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
CLTA-203ENST00000396603 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
CLTA-203ENST00000396603 ICAM4Q14773 271 aa11.47□□□□□ -0.57
CLTA-203ENST00000396603 SPINK13Q1W4C9 94 aa11.47□□□□□ -0.57
CLTA-203ENST00000396603 DPPA3Q6W0C5 159 aa11.47□□□□□ -0.57
CLTA-203ENST00000396603 RXFP4Q8TDU9 374 aa11.47□□□□□ -0.57
CLTA-203ENST00000396603 ATG101Q9BSB4 218 aa11.47□□□□□ -0.57
CLTA-203ENST00000396603 M0R2Z0 102 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 ATP5G1P05496 136 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 ATP5G3P48201 142 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 TAS2R60P59551 318 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 RANP62826 216 aaKnown RBP11.46□□□□□ -0.57
CLTA-203ENST00000396603 LGALSLQ3ZCW2 172 aaPredicted RBP11.46□□□□□ -0.57
CLTA-203ENST00000396603 ZNF493Q6ZR52 646 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 CMTM2Q8TAZ6 248 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 ZNF503Q96F45 646 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 PHYHIPLQ96FC7 376 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 C16orf74Q96GX8 76 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 Q9H3A6 140 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 OTORQ9NRC9 128 aa11.46□□□□□ -0.57
CLTA-203ENST00000396603 A0A1B0GVG6 124 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 CBY3A6NI87 242 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 ZNF705GA8MUZ8 300 aaPredicted RBP11.45□□□□□ -0.58
CLTA-203ENST00000396603 HMGB3O15347 200 aaKnown RBP11.45□□□□□ -0.58
CLTA-203ENST00000396603 GCHFRP30047 84 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 CCL18P55774 89 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 EXOC3-AS1Q8N2X6 119 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 ZNRF2Q8NHG8 242 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 ODF3Q96PU9 254 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 C20orf144Q9BQM9 153 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 HSPG2P98160 4391 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 ABCA13Q86UQ4 5058 aa11.45□□□□□ -0.58
CLTA-203ENST00000396603 NBDYA0A0U1RRE5 68 aa11.44□□□□□ -0.58
CLTA-203ENST00000396603 M0R3E3 92 aa11.44□□□□□ -0.58
CLTA-203ENST00000396603 RAB5CP51148 216 aa11.44□□□□□ -0.58
CLTA-203ENST00000396603 TMEM78Q5T7P6 136 aa11.44□□□□□ -0.58
CLTA-203ENST00000396603 IQCF2Q8IXL9 164 aa11.44□□□□□ -0.58
CLTA-203ENST00000396603 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms