RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 B3GALT5-AS1P59052 145 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 CENPVQ7Z7K6 275 aaPredicted RBP6.8□□□□□ -1.32
NDE1-202ENST00000396355 GATD1Q8NB37 220 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 HS3ST6Q96QI5 342 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 TRAV8-3A0A0A6YYJ7 113 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 GGTLC3B5MD39 225 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 S100A4P26447 101 aaKnown RBP6.8□□□□□ -1.32
NDE1-202ENST00000396355 FGF12P61328 243 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 HIST1H4AP62805 103 aaKnown RBP6.8□□□□□ -1.32
NDE1-202ENST00000396355 HCP5Q6MZN7 132 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 ODF3L1Q8IXM7 274 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 SETD2Q9BYW2 2564 aaPredicted RBP6.8□□□□□ -1.32
NDE1-202ENST00000396355 HIVEP3Q5T1R4 2406 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 BRI3O95415 125 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 IGKV1-39P01597 117 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 IGKV1D-39P04432 117 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 RFPL3SP0C7P2 107 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 MYOD1P15172 320 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 AREGP15514 252 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 LINC00305Q7Z4B0 112 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 GGNQ86UU5 652 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 OR11H6Q8NGC7 330 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 FAM57AQ8TBR7 257 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 TM2D2Q9BX73 214 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 F5H697 171 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 TIMM8AO60220 97 aaPredicted RBP6.79□□□□□ -1.32
NDE1-202ENST00000396355 FKBP2P26885 142 aaKnown RBP6.79□□□□□ -1.32
NDE1-202ENST00000396355 PRB3Q04118 309 aaPredicted RBP6.79□□□□□ -1.32
NDE1-202ENST00000396355 FLNCQ14315 2725 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 WFDC11Q8NEX6 87 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 HES7Q9BYE0 225 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 TRGV11A0A075B6L2 103 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 PRRG2O14669 202 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 MGPP08493 103 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 MAGEA5P43359 124 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 FAM27BQ5VT28 67 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 LINC01545Q5VT33 79 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 ZNF645Q8N7E2 425 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 DUX3Q96PT4 197 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 KLF13Q9Y2Y9 288 aaPredicted RBP6.79□□□□□ -1.32
NDE1-202ENST00000396355 TEX15Q9BXT5 2789 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 TRAV13-1A0A0B4J241 112 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
NDE1-202ENST00000396355 FGF6P10767 208 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 Q0VFX4 171 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 GDF5OSQ5U4N7 250 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 C21orf62Q9NYP8 219 aa6.79□□□□□ -1.32
NDE1-202ENST00000396355 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
NDE1-202ENST00000396355 A0A0U1RRA0 63 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 C21orf140B9A014 251 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 LYZL6O75951 148 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 SUB1P53999 127 aaKnown RBP eCLIP6.78□□□□□ -1.32
NDE1-202ENST00000396355 C20orf204Q6ZNR8 217 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 DCTN5Q9BTE1 182 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 IGKV1-6A0A0C4DH72 117 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 TMEM213A2RRL7 107 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 CIRBPQ14011 172 aaKnown RBP6.78□□□□□ -1.32
NDE1-202ENST00000396355 RPL39P5Q59GN2 51 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 SCGB3A1Q96QR1 104 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 MRPL35Q9NZE8 188 aaKnown RBP6.78□□□□□ -1.32
NDE1-202ENST00000396355 TRAV3A0A0B4J244 114 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 C15orf62A8K5M9 175 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 COX6B1P14854 86 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
NDE1-202ENST00000396355 LOXL1Q08397 574 aaPredicted RBP6.78□□□□□ -1.32
NDE1-202ENST00000396355 KRTAP27-1Q3LI81 207 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 ZNF826PQ6ZT77 177 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 TMEM158Q8WZ71 300 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 V9GYY9 64 aa6.78□□□□□ -1.32
NDE1-202ENST00000396355 H3BMM0 161 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 K7EM74 188 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 TMEM42Q69YG0 159 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 ATP5L2Q7Z4Y8 100 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 FDCSPQ8NFU4 85 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 UBE2WQ96B02 151 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 IFI27L2Q9H2X8 130 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 CENPVL3A0A0U1RRI6 287 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 PINLYPA6NC86 204 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 CRXO43186 299 aaPredicted RBP6.77□□□□□ -1.33
NDE1-202ENST00000396355 PRR30Q53SZ7 412 aaPredicted RBP6.77□□□□□ -1.33
NDE1-202ENST00000396355 SPANXN1Q5VSR9 72 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 GFRALQ6UXV0 394 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 C10orf35Q96D05 121 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 FGF23Q9GZV9 251 aaPredicted RBP6.77□□□□□ -1.33
NDE1-202ENST00000396355 ABCA2Q9BZC7 2435 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 TCRAP04437 139 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 POU2AF1Q16633 256 aa6.77□□□□□ -1.33
NDE1-202ENST00000396355 TRPT1Q86TN4 253 aaKnown RBP6.77□□□□□ -1.33
NDE1-202ENST00000396355 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 hADV29S1A0JD25 119 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 MGST3O14880 152 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 MEOX1P50221 254 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 TMEM78Q5T7P6 136 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 LINC00527Q9UJ94 153 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 NDUFS7O75251 213 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 LGALS9BQ3B8N2 356 aa6.76□□□□□ -1.33
NDE1-202ENST00000396355 LGALS9CQ6DKI2 356 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms