RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 FABP2P12104 132 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 GNLYP22749 145 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 TNP2Q05952 138 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 C5orf64Q2M2E5 130 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 ZNF329Q86UD4 541 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 PPP1R27Q86WC6 154 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 ZNF843Q8N446 348 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 OR1L4Q8NGR5 311 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 MRAP2Q96G30 205 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 SLC25A2Q9BXI2 301 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 GFRA4Q9GZZ7 299 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 SPANXB1Q9NS25 103 aaPredicted RBP4.2□□□□□ -1.74
VPS41-203ENST00000395969 CADP27708 2225 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 AGRNO00468 2067 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 MUC6Q6W4X9 2439 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 A0A1W2PRD5 423 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 A0A1W2PRF3 423 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 A0A1W2PRM7 423 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 C19orf84I3L1E1 186 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 MRPS12O15235 138 aaKnown RBP4.19□□□□□ -1.74
VPS41-203ENST00000395969 NBR2O15453 112 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 EGR2P11161 476 aaPredicted RBP4.19□□□□□ -1.74
VPS41-203ENST00000395969 GCSHP23434 173 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 SAMD5Q5TGI4 173 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 SIGLEC15Q6ZMC9 328 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 GTSF1Q8WW33 167 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 MLST8Q9BVC4 326 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 UFC1Q9Y3C8 167 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 DSPP15924 2871 aaKnown RBP4.19□□□□□ -1.74
VPS41-203ENST00000395969 CACNA1BQ00975 2339 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 A1L4Q6 167 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 C19orf71A6NCJ1 209 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 F8W1H4 67 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 PEX7O00628 323 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 TSPAN13O95857 204 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 IGHV3-7P01780 117 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 IGHV4-39P01824 125 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 APOHP02749 345 aaPredicted RBP4.19□□□□□ -1.74
VPS41-203ENST00000395969 NMUP48645 174 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 CFHR3Q02985 330 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 SRSF1Q07955 248 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS41-203ENST00000395969 Q8N2B8 174 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 PHLDA1Q8WV24 401 aaPredicted RBP4.19□□□□□ -1.74
VPS41-203ENST00000395969 PSMG3-AS1Q96PY0 264 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 VGLL1Q99990 258 aa4.19□□□□□ -1.74
VPS41-203ENST00000395969 GVINP1Q7Z2Y8 2422 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 TRBV20-1A0A075B6N2 111 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 ZFP36P26651 326 aaKnown RBP4.18□□□□□ -1.74
VPS41-203ENST00000395969 PDE6HQ13956 83 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 LGALS9BQ3B8N2 356 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 LGALS9CQ6DKI2 356 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 C18orf15Q96N68 181 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 C20orf78Q9BR46 151 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 RPP21Q9H633 154 aaKnown RBP4.18□□□□□ -1.74
VPS41-203ENST00000395969 UBTD1Q9HAC8 227 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 ENY2Q9NPA8 101 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 ZNF492Q9P255 531 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 TMSB15BA0A087X1C1 80 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 A0A096LNJ9 63 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 NPIPB6E9PJ23 425 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 FCER1GP30273 86 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 MORN5Q5VZ52 161 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 LINC00322Q6ZN03 302 aaPredicted RBP4.18□□□□□ -1.74
VPS41-203ENST00000395969 VMO1Q7Z5L0 202 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 VKORC1L1Q8N0U8 176 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 TEX29Q8N6K0 151 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 OR8A1Q8NGG7 326 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 PIFOQ8TCI5 191 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 MYOZ3Q8TDC0 251 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 TTTY13Q9BZ97 58 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 PSG8Q9UQ74 426 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 U3KQE9 123 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 TRBV7-9A0A0J9YWB2 115 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 A8MWL6 223 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 F8W735 103 aaPredicted RBP4.18□□□□□ -1.74
VPS41-203ENST00000395969 H3BMG7 143 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 J3QR89 54 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 SMIM13P0DJ93 91 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 RPL27AP46776 148 aaKnown RBP4.18□□□□□ -1.74
VPS41-203ENST00000395969 MRPL53Q96EL3 112 aaKnown RBP4.18□□□□□ -1.74
VPS41-203ENST00000395969 SPAG8Q99932 426 aaPredicted RBP4.18□□□□□ -1.74
VPS41-203ENST00000395969 ANAPC13Q9BS18 74 aa4.18□□□□□ -1.74
VPS41-203ENST00000395969 K7EIM0 57 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 UBE2L3P68036 154 aaKnown RBP4.17□□□□□ -1.74
VPS41-203ENST00000395969 LY6DQ14210 128 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 TMEM86BQ8N661 226 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 Q8N9W7 124 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 HIGD1BQ9P298 99 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 TRAV5A0A0B4J249 113 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 OR11H12B2RN74 326 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 E7EUB6 86 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 MT-ATP8P03928 68 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 CSN1S1P47710 185 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 MOB3BQ86TA1 216 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 DEFB108BQ8NET1 73 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 OR11H1Q8NG94 326 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 OR11H2Q8NH07 326 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 GPR82Q96P67 336 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 MRPL16Q9NX20 251 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms