RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 NDUFS7O75251 213 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 ZNF562Q6V9R5 426 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 TIMD4Q96H15 378 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 CSTL1Q9H114 145 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 PRTN3P24158 256 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 WFDC3Q8IUB2 231 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 JMJD8Q96S16 334 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 THYN1Q9P016 225 aa16.05■□□□□ 0.16
CLK3-202ENST00000395066 IGHV3-66A0A0C4DH42 116 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 HBDP02042 147 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 OR9G4Q8NGQ1 327 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 MEGF9Q9H1U4 602 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 A1L4Q6 167 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 SAP30O75446 220 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 CTSGP08311 255 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 ZFP36P26651 326 aaKnown RBP16.04■□□□□ 0.16
CLK3-202ENST00000395066 HSD52Q0P140 79 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 PRR25Q96S07 402 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 MSRB1Q9NZV6 116 aa16.04■□□□□ 0.16
CLK3-202ENST00000395066 IGHV3OR16-13A0A075B7E8 117 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 IGHV3-74A0A0B4J1X5 117 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 H3BUT2 72 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 IGHG4P01861 327 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 NBL1P41271 181 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 MRPL51Q4U2R6 128 aaKnown RBP16.03■□□□□ 0.16
CLK3-202ENST00000395066 ADORA2A-AS1P86434 159 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 ERCC8Q13216 396 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 PDE6HQ13956 83 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 KIR3DS1Q14943 382 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 FER1L6-AS1Q8NA97 138 aa16.03■□□□□ 0.16
CLK3-202ENST00000395066 GAS8-AS1O95177 125 aa16.02■□□□□ 0.16
CLK3-202ENST00000395066 TWIST1Q15672 202 aa16.02■□□□□ 0.16
CLK3-202ENST00000395066 TTC9CQ8N5M4 171 aa16.02■□□□□ 0.16
CLK3-202ENST00000395066 IFI27L1Q96BM0 104 aa16.02■□□□□ 0.15
CLK3-202ENST00000395066 NAA38Q9BRA0 125 aaKnown RBP16.02■□□□□ 0.15
CLK3-202ENST00000395066 SIVA1O15304 175 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 TMEM11P17152 192 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 PAX8Q06710 450 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 ADAMTSL5Q6ZMM2 481 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 RNF182Q8N6D2 247 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 A0A0G2JLM5 398 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 PRAC2D3DTV9 90 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 K7EP34 96 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 PPIFP30405 207 aaKnown RBP16.01■□□□□ 0.15
CLK3-202ENST00000395066 ZNF575Q86XF7 245 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 SELENOKQ9Y6D0 94 aa16.01■□□□□ 0.15
CLK3-202ENST00000395066 IGHV7-81A0A0B4J1V7 117 aa16■□□□□ 0.15
CLK3-202ENST00000395066 M0R1W7 72 aa16■□□□□ 0.15
CLK3-202ENST00000395066 NPYP01303 97 aa16■□□□□ 0.15
CLK3-202ENST00000395066 RPL7P18124 248 aaKnown RBP16■□□□□ 0.15
CLK3-202ENST00000395066 ECSCRQ19T08 205 aa16■□□□□ 0.15
CLK3-202ENST00000395066 OR4X2Q8NGF9 303 aa16■□□□□ 0.15
CLK3-202ENST00000395066 CKS2P33552 79 aa15.99■□□□□ 0.15
CLK3-202ENST00000395066 IGHV3-49A0A0A0MS15 119 aa15.99■□□□□ 0.15
CLK3-202ENST00000395066 NMUP48645 174 aa15.99■□□□□ 0.15
CLK3-202ENST00000395066 FBXL19-AS1Q494R0 122 aa15.99■□□□□ 0.15
CLK3-202ENST00000395066 COL25A1Q9BXS0 654 aaPredicted RBP15.99■□□□□ 0.15
CLK3-202ENST00000395066 A0A1W2PPR1 153 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 ORM1P02763 201 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 PCP2Q8IVA1 136 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 Q8N6K4 173 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 OR2K2Q8NGT1 345 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 RAB37Q96AX2 223 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 C11orf71Q6IPW1 123 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 MSRB2Q9Y3D2 182 aa15.98■□□□□ 0.15
CLK3-202ENST00000395066 C15orf32Q32M92 178 aa15.97■□□□□ 0.15
CLK3-202ENST00000395066 PRSS57Q6UWY2 283 aa15.97■□□□□ 0.15
CLK3-202ENST00000395066 S100A7AQ86SG5 101 aa15.97■□□□□ 0.15
CLK3-202ENST00000395066 ZNF48Q96MX3 618 aaPredicted RBP15.97■□□□□ 0.15
CLK3-202ENST00000395066 LINC01548A6NM66 108 aa15.97■□□□□ 0.15
CLK3-202ENST00000395066 Q8N9W7 124 aa15.97■□□□□ 0.15
CLK3-202ENST00000395066 C18orf15Q96N68 181 aa15.97■□□□□ 0.15
CLK3-202ENST00000395066 DKK2Q9UBU2 259 aa15.97■□□□□ 0.15
CLK3-202ENST00000395066 S100A7P31151 101 aa15.96■□□□□ 0.15
CLK3-202ENST00000395066 RIPPLY3P57055 190 aa15.96■□□□□ 0.15
CLK3-202ENST00000395066 COL12A1Q99715 3063 aa15.96■□□□□ 0.15
CLK3-202ENST00000395066 ZNF207O43670 478 aaKnown RBP15.96■□□□□ 0.14
CLK3-202ENST00000395066 G3V4G9 280 aa15.95■□□□□ 0.14
CLK3-202ENST00000395066 COX8CQ7Z4L0 72 aa15.95■□□□□ 0.14
CLK3-202ENST00000395066 G3V318 75 aa15.95■□□□□ 0.14
CLK3-202ENST00000395066 CLEC3BP05452 202 aa15.95■□□□□ 0.14
CLK3-202ENST00000395066 EVI2AP22794 236 aa15.95■□□□□ 0.14
CLK3-202ENST00000395066 CCDC144NLQ6NUI1 221 aa15.95■□□□□ 0.14
CLK3-202ENST00000395066 A0A1W2PPM0 123 aa15.94■□□□□ 0.14
CLK3-202ENST00000395066 GATA1P15976 413 aaPredicted RBP15.94■□□□□ 0.14
CLK3-202ENST00000395066 IL17RELQ6ZVW7 336 aa15.94■□□□□ 0.14
CLK3-202ENST00000395066 ATP6V0E1O15342 81 aa15.94■□□□□ 0.14
CLK3-202ENST00000395066 IGLC6P0CF74 106 aa15.94■□□□□ 0.14
CLK3-202ENST00000395066 RAXQ9Y2V3 346 aa15.94■□□□□ 0.14
CLK3-202ENST00000395066 HIVEP3Q5T1R4 2406 aa15.93■□□□□ 0.14
CLK3-202ENST00000395066 Q6ZQT7 251 aa15.93■□□□□ 0.14
CLK3-202ENST00000395066 NPFFR1Q9GZQ6 430 aa15.93■□□□□ 0.14
CLK3-202ENST00000395066 SPCS1Q9Y6A9 102 aa15.93■□□□□ 0.14
CLK3-202ENST00000395066 NEGR1Q7Z3B1 354 aa15.93■□□□□ 0.14
CLK3-202ENST00000395066 OR5A1Q8NGJ0 315 aa15.92■□□□□ 0.14
CLK3-202ENST00000395066 RNF185Q96GF1 192 aa15.92■□□□□ 0.14
CLK3-202ENST00000395066 MAP1AP78559 2803 aaPredicted RBP15.92■□□□□ 0.14
CLK3-202ENST00000395066 BMI1P35226 326 aa15.92■□□□□ 0.14
CLK3-202ENST00000395066 CLEC19AQ6UXS0 136 aa15.92■□□□□ 0.14
CLK3-202ENST00000395066 MAP1LC3AQ9H492 121 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms